Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-363P-201ENST00000362895 105 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 SNORA18-201ENST00000384416 132 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-816P-201ENST00000390914 107 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-1268P-201ENST00000391214 107 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-1239P-201ENST00000391310 107 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 snoU13.25-201ENST00000458945 104 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 AP000753.3-201ENST00000604083 169 ntBASIC1.87□□□□□ -2.11
RUFY4Q6ZNE9 MIR377-201ENST00000362145 69 ntBASIC1.86□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.78-201ENST00000362970 110 ntBASIC1.86□□□□□ -2.11
RUFY4Q6ZNE9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.86□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-165P-201ENST00000517170 99 ntBASIC1.86□□□□□ -2.11
RUFY4Q6ZNE9 FAM71BP1-201ENST00000604431 523 ntBASIC1.86□□□□□ -2.11
RUFY4Q6ZNE9 AC244023.1-201ENST00000426884 112 ntBASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 RPL39P25-201ENST00000449384 154 ntBASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 snoU13.2-201ENST00000459201 104 ntBASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 AC242498.1-201ENST00000604134 111 ntBASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 uc_338.28-201ENST00000612082 187 ntBASIC1.85□□□□□ -2.11
RUFY4Q6ZNE9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 MIR103A2-201ENST00000362154 78 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 SNORA25.3-201ENST00000363205 127 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU4-67P-201ENST00000364569 141 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-147P-201ENST00000383983 107 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 SNORA32-201ENST00000384072 121 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-342P-201ENST00000384521 104 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 MIR518E-201ENST00000385252 88 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 MIR1185-1-201ENST00000408598 86 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-613P-201ENST00000410412 108 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-554P-201ENST00000410466 106 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RPS27P16-201ENST00000425758 201 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 MIR1270-201ENST00000459320 83 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.84□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-766P-201ENST00000362478 107 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-409P-201ENST00000384114 104 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-616P-201ENST00000384353 107 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 RNU7-79P-201ENST00000516082 62 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
RUFY4Q6ZNE9 RNA5SP237-201ENST00000410414 113 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-733P-201ENST00000410759 104 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 RN7SKP88-201ENST00000516847 250 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 7SK.8-201ENST00000612110 250 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 7SK.13-201ENST00000622040 250 ntBASIC1.82□□□□□ -2.12
RUFY4Q6ZNE9 SNORD114-10-201ENST00000363409 72 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 MIR563-201ENST00000385080 79 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-447P-201ENST00000410293 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-355P-201ENST00000410427 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-791P-201ENST00000410467 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-705P-201ENST00000410601 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-860P-201ENST00000410860 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-785P-201ENST00000411324 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 U6.90-201ENST00000614007 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 AL662814.1-201ENST00000617364 121 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 U6.70-201ENST00000620287 104 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 MIR6516-201ENST00000630554 81 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 MIR1255B1-201ENST00000636325 63 ntBASIC1.81□□□□□ -2.12
RUFY4Q6ZNE9 SNORD115-35-201ENST00000365122 82 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-32P-201ENST00000383948 107 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-756P-201ENST00000383997 107 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 SNORA51.5-201ENST00000384126 131 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-13P-201ENST00000384248 107 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-12P-201ENST00000384604 107 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-41P-201ENST00000384741 107 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 MIR588-201ENST00000384900 83 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU7-95P-201ENST00000459222 64 ntBASIC1.8□□□□□ -2.12
RUFY4Q6ZNE9 RNU6-580P-201ENST00000365159 107 ntBASIC1.79□□□□□ -2.12
RUFY4Q6ZNE9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
RUFY4Q6ZNE9 RNU7-2P-201ENST00000516096 62 ntBASIC1.79□□□□□ -2.12
RUFY4Q6ZNE9 AC141846.1-201ENST00000568348 142 ntBASIC1.79□□□□□ -2.12
RUFY4Q6ZNE9 MIR4694-201ENST00000578534 80 ntBASIC1.79□□□□□ -2.12
RUFY4Q6ZNE9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 RNU4-36P-201ENST00000364294 144 ntBASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 SEPT14P17-201ENST00000617978 177 ntBASIC1.78□□□□□ -2.12
RUFY4Q6ZNE9 RNY1P13-201ENST00000365030 105 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-949P-201ENST00000384040 107 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 Y_RNA.544-201ENST00000384650 113 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 MT-TF-201ENST00000387314 71 ntBASIC1.77□□□□□ -2.13
RUFY4Q6ZNE9 RNU6-521P-201ENST00000516663 105 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms