Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
LRFN4Q6PJG9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 SNORD116-10-201ENST00000363791 102 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 SNORA67.3-201ENST00000384366 140 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 U8.15-201ENST00000390947 134 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 snoU13.25-201ENST00000458945 104 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 AC005908.1-201ENST00000468701 347 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RN7SKP12-201ENST00000516275 143 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 MIR3945-201ENST00000581853 98 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 RNU6-90P-201ENST00000606352 106 ntBASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LRFN4Q6PJG9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 MIR3198-2-201ENST00000577868 80 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 SNORA4-201ENST00000584302 138 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 RNU6-86P-201ENST00000606534 107 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
LRFN4Q6PJG9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 MIR377-201ENST00000362145 69 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 MIR103A2-201ENST00000362154 78 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.17-201ENST00000362433 111 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 RNA5SP264-201ENST00000363115 107 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 RNY1P2-201ENST00000364820 117 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 SPINT5P-201ENST00000448174 155 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 MIR6740-201ENST00000618268 113 ntBASIC1.95□□□□□ -2.1
LRFN4Q6PJG9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 MIR1185-1-201ENST00000408598 86 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.593-201ENST00000410292 98 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 RNU6-613P-201ENST00000410412 108 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 RNU7-62P-201ENST00000458856 62 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 MIR3937-201ENST00000580135 106 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 AC103810.7-201ENST00000607821 91 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 MIR6516-201ENST00000630554 81 ntBASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LRFN4Q6PJG9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 RNU6-1244P-201ENST00000363614 108 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 SNORD58A-201ENST00000383875 65 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 MT-TF-201ENST00000387314 71 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 RNU6-205P-201ENST00000390858 107 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 MTND5P40-201ENST00000559945 246 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 SEPT14P17-201ENST00000617978 177 ntBASIC1.93□□□□□ -2.1
LRFN4Q6PJG9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 MIR30D-201ENST00000362283 70 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 Y_RNA.190-201ENST00000363964 101 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 SNORD116-22-201ENST00000384430 92 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 MIR3664-201ENST00000579074 99 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 AC012676.2-201ENST00000619258 186 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRFN4Q6PJG9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 HSBP1P2-201ENST00000299671 229 ntBASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 MIR494-201ENST00000349529 81 ntBASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
LRFN4Q6PJG9 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
LRFN4Q6PJG9 RNY1P10-201ENST00000363268 113 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 RNY1P1-201ENST00000364372 112 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 SNORA70B-201ENST00000384210 135 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 RNU6-1152P-201ENST00000384576 107 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 Z98742.3-201ENST00000418637 326 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 AC138749.4-201ENST00000563970 127 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 IGLL4P-201ENST00000614590 133 ntBASIC1.89□□□□□ -2.11
LRFN4Q6PJG9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 RNA5SP173-201ENST00000364857 136 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 RNU6-580P-201ENST00000365159 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms