Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-109P-201ENST00000516364 107 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 RNU6-184P-201ENST00000516514 107 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 AC242498.1-201ENST00000604134 111 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RNU4-67P-201ENST00000364569 141 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 MIR577-201ENST00000385196 96 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RPL39P25-201ENST00000449384 154 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RNU6-970P-201ENST00000516312 107 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
ZNF549Q6P9A3 RNA5SP48-201ENST00000363969 126 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 SNORA18-201ENST00000384416 132 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 MIR605-201ENST00000385078 83 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 AC108729.3-201ENST00000513484 108 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 CYP3A52P-201ENST00000563326 91 ntBASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ZNF549Q6P9A3 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1255P-201ENST00000363434 112 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.694-201ENST00000516677 117 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 MIR4498-201ENST00000577599 66 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 MIR4694-201ENST00000578534 80 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 AL357312.1-201ENST00000603879 298 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 snoU13.31-201ENST00000607291 104 ntBASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ZNF549Q6P9A3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNY3P2-201ENST00000362918 102 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 MIR1185-1-201ENST00000408598 86 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU6-733P-201ENST00000410759 104 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU6-521P-201ENST00000516663 105 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU6-158P-201ENST00000517104 100 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 AC141557.1-201ENST00000540982 400 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 MIR5582-201ENST00000579697 68 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 MIR4422-201ENST00000581938 83 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 MIR8063-201ENST00000621930 81 ntBASIC1.3□□□□□ -2.2
ZNF549Q6P9A3 RNU6-832P-201ENST00000363319 107 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 SNORD115-35-201ENST00000365122 82 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 MIR488-201ENST00000365739 83 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU6-409P-201ENST00000384114 104 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 SNORD38B-201ENST00000384690 67 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 MIR206-201ENST00000384872 86 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 MIR563-201ENST00000385080 79 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 SNORD77B-201ENST00000391112 67 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 SNORD67.1-201ENST00000516618 108 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 FAM71BP1-201ENST00000604431 523 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 SNORD38B-202ENST00000625943 69 ntBASIC1.29□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNY1P13-201ENST00000365030 105 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 SNORA7.5-201ENST00000410672 110 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 UBL5P1-201ENST00000507979 193 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU7-79P-201ENST00000516082 62 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU7-137P-201ENST00000516788 62 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
ZNF549Q6P9A3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
ZNF549Q6P9A3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 MTATP8P2-201ENST00000435212 202 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 snoU13.2-201ENST00000459201 104 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
ZNF549Q6P9A3 RNU7-2P-201ENST00000516096 62 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms