Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-403P-201ENST00000363163 104 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 RNU6-103P-201ENST00000363686 107 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 RNY1P13-201ENST00000365030 105 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 SEPT7P4-201ENST00000437076 306 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 HAR1A.1-201ENST00000459583 118 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 Y_RNA.679-201ENST00000516416 91 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 RNU6-1258P-201ENST00000516911 111 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 MIR378D2-201ENST00000580636 98 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 MIR6755-201ENST00000619993 66 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
ATL3Q6DD88 Y_RNA.174-201ENST00000363781 105 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 RNU4-17P-201ENST00000365598 141 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 SNORA79-201ENST00000408376 140 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 Y_RNA.604-201ENST00000410574 102 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 RNU5E-9P-201ENST00000411164 104 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 AC069271.1-201ENST00000445577 156 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 RNA5SP47-201ENST00000517230 109 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 MIR5589-201ENST00000579442 60 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 MIR4744-201ENST00000581563 82 ntBASIC0.08□□□□□ -2.4
ATL3Q6DD88 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 Y_RNA.262-201ENST00000364641 102 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 Y_RNA.536-201ENST00000384621 113 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 RNU6-291P-201ENST00000384720 107 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 MIR1302-6-201ENST00000408466 90 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 RNU6-1086P-201ENST00000410930 100 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 RNU6-635P-201ENST00000516651 102 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 RNU6-1153P-201ENST00000516760 105 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
ATL3Q6DD88 Y_RNA.292-201ENST00000364904 97 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 Y_RNA.352-201ENST00000365439 102 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 SNORA18-201ENST00000384416 132 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 Y_RNA.539-201ENST00000384635 107 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 SNORA20-201ENST00000384662 132 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 RNU6-713P-201ENST00000384761 107 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 MIR624-201ENST00000385217 97 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 MTATP8P1-201ENST00000467115 207 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 RNU6-469P-201ENST00000516253 101 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 SNORD116-25-201ENST00000516517 92 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 Y_RNA.757-201ENST00000578934 114 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 AC044792.1-201ENST00000593294 196 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
ATL3Q6DD88 RNU6-238P-201ENST00000363313 106 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-578P-201ENST00000390980 103 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 MIR548F4-201ENST00000408515 105 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RPL39P25-201ENST00000449384 154 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 SNORA25.16-201ENST00000516741 121 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNU6-135P-201ENST00000516769 101 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 MTND5P34-201ENST00000568888 325 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 MIR6759-201ENST00000638110 65 ntBASIC0.05□□□□□ -2.4
ATL3Q6DD88 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNY4P28-201ENST00000365281 93 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 Y_RNA.422-201ENST00000384054 114 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNU6-30P-201ENST00000384561 107 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 Y_RNA.574-201ENST00000384766 95 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 AL121914.1-201ENST00000450188 156 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNU6-893P-201ENST00000458841 100 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNU7-79P-201ENST00000516082 62 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNY3P16-201ENST00000516338 101 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 RNA5SP476-201ENST00000516613 103 ntBASIC0.04□□□□□ -2.4
ATL3Q6DD88 MTND5P32-201ENST00000560711 1802 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 Y_RNA.277-201ENST00000364754 102 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 Y_RNA.461-201ENST00000384263 103 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 RNU6-1149P-201ENST00000516810 97 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 Y_RNA.720-201ENST00000517166 92 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 RNU7-35P-201ENST00000517174 62 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 MIR4639-201ENST00000584938 69 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 U6.104-201ENST00000637979 90 ntBASIC0.03□□□□□ -2.4
ATL3Q6DD88 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.41
ATL3Q6DD88 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.171-201ENST00000363760 102 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 RNA5SP245-201ENST00000364239 121 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 RNU6-1126P-201ENST00000384002 107 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 Y_RNA.549-201ENST00000384657 102 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 RNU6-535P-201ENST00000384722 107 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 RNU7-70P-201ENST00000516941 66 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 MRPS18CP4-201ENST00000535821 231 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 MIR4802-201ENST00000581881 80 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 AC091304.10-201ENST00000641554 121 ntBASIC0.02□□□□□ -2.41
ATL3Q6DD88 RNA5SP368-201ENST00000364298 116 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 Y_RNA.396-201ENST00000383949 103 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 RNU6V-201ENST00000384105 107 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 SNORD58.1-201ENST00000391313 66 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 RNU6-1194P-201ENST00000516208 104 ntBASIC0.01□□□□□ -2.41
ATL3Q6DD88 Y_RNA.697-201ENST00000516776 113 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms