Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 RNU7-48P-201ENST00000458875 63 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 Y_RNA.705-201ENST00000516862 110 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR3945-201ENST00000581853 98 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 MIR6740-201ENST00000618268 113 ntBASIC1.84□□□□□ -2.11
HLA-DQA1Q5Y7H0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL596028.1-201ENST00000326971 197 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR494-201ENST00000349529 81 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 Y_RNA.98-201ENST00000363109 102 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNY1P10-201ENST00000363268 113 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR450A2-201ENST00000385022 100 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-887P-201ENST00000410660 100 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RPL39P39-201ENST00000455840 151 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL133373.1-201ENST00000497098 94 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU1-41P-201ENST00000516161 162 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU1-48P-201ENST00000516400 162 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 SEPT14P17-201ENST00000617978 177 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
HLA-DQA1Q5Y7H0 Y_RNA.17-201ENST00000362433 111 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-813P-201ENST00000384691 107 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 Y_RNA.593-201ENST00000410292 98 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-447P-201ENST00000410293 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-355P-201ENST00000410427 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-791P-201ENST00000410467 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-705P-201ENST00000410601 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-860P-201ENST00000410860 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-785P-201ENST00000411324 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 AC103810.7-201ENST00000607821 91 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 U6.90-201ENST00000614007 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 U6.70-201ENST00000620287 104 ntBASIC1.82□□□□□ -2.12
HLA-DQA1Q5Y7H0 SNORD114-1-201ENST00000362705 72 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNA5SP173-201ENST00000364857 136 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 U8.15-201ENST00000390947 134 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-972P-201ENST00000391208 107 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR548G-201ENST00000408442 89 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR1185-1-201ENST00000408598 86 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 AC079804.2-201ENST00000490376 200 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 AP003716.2-201ENST00000528260 108 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR4439-201ENST00000583746 80 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-90P-201ENST00000606352 106 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR6840-201ENST00000611937 71 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR6516-201ENST00000630554 81 ntBASIC1.81□□□□□ -2.12
HLA-DQA1Q5Y7H0 Y_RNA.96-201ENST00000363092 109 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 SPINT5P-201ENST00000448174 155 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 RN7SKP12-201ENST00000516275 143 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 AC133485.1-201ENST00000567176 124 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 AP000753.3-201ENST00000604083 169 ntBASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNA5SP264-201ENST00000363115 107 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 SNORD58A-201ENST00000383875 65 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-573P-201ENST00000383938 106 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 Y_RNA.567-201ENST00000384736 106 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR563-201ENST00000385080 79 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNA5SP95-201ENST00000410319 137 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-592P-201ENST00000411333 103 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU1-98P-201ENST00000458992 160 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR3937-201ENST00000580135 106 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR4264-201ENST00000583520 66 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 uc_338.6-201ENST00000613544 171 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 AP001362.1-201ENST00000625165 124 ntBASIC1.79□□□□□ -2.12
HLA-DQA1Q5Y7H0 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 AL161722.3-201ENST00000605789 2983 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR103A2-201ENST00000362154 78 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-654P-201ENST00000364373 107 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6-820P-201ENST00000384273 107 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 RNU7-62P-201ENST00000458856 62 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR2115-201ENST00000516657 100 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MTND5P40-201ENST00000559945 246 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 AC012676.2-201ENST00000619258 186 ntBASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DQA1Q5Y7H0 MIR30D-201ENST00000362283 70 ntBASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms