Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC087499.7-201ENST00000441958 109 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 RNU7-123P-201ENST00000515911 60 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 RNA5SP272-201ENST00000516095 111 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 MIR4676-201ENST00000583078 72 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 AC108081.1-201ENST00000604358 221 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 AL359821.1-201ENST00000605519 182 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 AC020891.4-201ENST00000605745 93 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 TUG1_4.1-201ENST00000619464 181 ntBASIC1.04□□□□□ -2.24
RNF220Q5VTB9 RNU6-647P-201ENST00000364243 107 ntBASIC1.03□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.568-201ENST00000384742 113 ntBASIC1.03□□□□□ -2.24
RNF220Q5VTB9 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
RNF220Q5VTB9 MIR4804-201ENST00000581683 73 ntBASIC1.03□□□□□ -2.24
RNF220Q5VTB9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 RNU6-949P-201ENST00000384040 107 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 MIR520F-201ENST00000384824 87 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 MIR938-201ENST00000401216 83 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 RNU7-79P-201ENST00000516082 62 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 RNU7-35P-201ENST00000517174 62 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.02□□□□□ -2.25
RNF220Q5VTB9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF220Q5VTB9 RNY1P10-201ENST00000363268 113 ntBASIC1.01□□□□□ -2.25
RNF220Q5VTB9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
RNF220Q5VTB9 SNORA40-201ENST00000388090 126 ntBASIC1.01□□□□□ -2.25
RNF220Q5VTB9 SNORD93-201ENST00000408813 74 ntBASIC1.01□□□□□ -2.25
RNF220Q5VTB9 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
RNF220Q5VTB9 RNY1P13-201ENST00000365030 105 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 Y_RNA.327-201ENST00000365201 102 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 MTND4LP9-201ENST00000427694 174 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 RNU7-56P-201ENST00000458744 62 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
RNF220Q5VTB9 RNY4P20-201ENST00000516678 93 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 MIR548AE2-201ENST00000583456 67 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
RNF220Q5VTB9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 SNORA32-201ENST00000384072 121 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 RNU6-364P-201ENST00000384387 107 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 SNORD99-201ENST00000408612 74 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 AL158147.1-201ENST00000443970 75 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 RN7SKP19-201ENST00000516016 252 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 Y_RNA.703-201ENST00000516846 111 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
RNF220Q5VTB9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RNF220Q5VTB9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-746P-201ENST00000384112 109 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 U8.15-201ENST00000390947 134 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU1-119P-201ENST00000391122 165 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-447P-201ENST00000410293 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-355P-201ENST00000410427 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-791P-201ENST00000410467 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-705P-201ENST00000410601 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU4-69P-201ENST00000410677 143 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-860P-201ENST00000410860 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU6-785P-201ENST00000411324 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 RNU7-156P-201ENST00000517214 74 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 MIR3133-201ENST00000583157 78 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 U6.90-201ENST00000614007 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 U6.70-201ENST00000620287 104 ntBASIC0.98□□□□□ -2.25
RNF220Q5VTB9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
RNF220Q5VTB9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
RNF220Q5VTB9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RNF220Q5VTB9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RNF220Q5VTB9 MIR520H-201ENST00000385126 88 ntBASIC0.97□□□□□ -2.25
RNF220Q5VTB9 RNU6-257P-201ENST00000410238 98 ntBASIC0.97□□□□□ -2.25
RNF220Q5VTB9 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
RNF220Q5VTB9 IGKV1-22-201ENST00000524313 326 ntBASIC0.97□□□□□ -2.25
RNF220Q5VTB9 SNORD92-201ENST00000585078 85 ntBASIC0.96□□□□□ -2.26
RNF220Q5VTB9 AL589743.1-201ENST00000551932 2712 ntBASIC0.96□□□□□ -2.26
RNF220Q5VTB9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RNF220Q5VTB9 SNORA25.9-201ENST00000365087 128 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 MIR539-201ENST00000365690 78 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 RNU4-83P-201ENST00000410863 133 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 RNA5SP136-201ENST00000410906 107 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.95□□□□□ -2.26
RNF220Q5VTB9 RNU7-102P-201ENST00000458948 62 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
RNF220Q5VTB9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RNF220Q5VTB9 SNORD50.2-201ENST00000365465 70 ntBASIC0.94□□□□□ -2.26
RNF220Q5VTB9 MIR613-201ENST00000385248 95 ntBASIC0.94□□□□□ -2.26
RNF220Q5VTB9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.94□□□□□ -2.26
RNF220Q5VTB9 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
RNF220Q5VTB9 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
RNF220Q5VTB9 RNU6-774P-201ENST00000363238 107 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 MIR759-201ENST00000390224 91 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 SNORD77B-201ENST00000391112 67 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 MIR1263-201ENST00000408324 86 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 AC022523.2-201ENST00000561045 150 ntBASIC0.93□□□□□ -2.26
RNF220Q5VTB9 MIR4491-201ENST00000581087 68 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms