Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VARS2Q5ST30 SNORD100-201ENST00000408573 76 ntBASIC3.23□□□□□ -1.89
VARS2Q5ST30 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
VARS2Q5ST30 PRELID3BP2-201ENST00000605362 201 ntBASIC3.23□□□□□ -1.89
VARS2Q5ST30 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VARS2Q5ST30 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
VARS2Q5ST30 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VARS2Q5ST30 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
VARS2Q5ST30 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNU6-53P-201ENST00000365367 106 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 MIR451A-201ENST00000385059 72 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNA5SP508-201ENST00000411327 119 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 EEF1A1P41-201ENST00000414667 207 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 Y_RNA.809-201ENST00000516058 95 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNU1-143P-201ENST00000516296 146 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 SNORA25.16-201ENST00000516741 121 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNA5SP437-201ENST00000517249 129 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 U1.23-201ENST00000610293 146 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNU1-68P-201ENST00000615382 146 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 U1.39-201ENST00000621562 146 ntBASIC3.22□□□□□ -1.89
VARS2Q5ST30 RNU6-1165P-201ENST00000410119 107 ntBASIC3.21□□□□□ -1.9
VARS2Q5ST30 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
VARS2Q5ST30 AC026271.5-201ENST00000577873 130 ntBASIC3.21□□□□□ -1.9
VARS2Q5ST30 AL078603.1-201ENST00000603824 313 ntBASIC3.21□□□□□ -1.9
VARS2Q5ST30 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VARS2Q5ST30 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VARS2Q5ST30 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 MIR520A-201ENST00000384862 85 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 MIR29C-201ENST00000385231 88 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 RNA5SP184-201ENST00000411071 108 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 MIR4491-201ENST00000581087 68 ntBASIC3.2□□□□□ -1.9
VARS2Q5ST30 MT-TF-201ENST00000387314 71 ntBASIC3.19□□□□□ -1.9
VARS2Q5ST30 BX510359.4-201ENST00000423750 193 ntBASIC3.19□□□□□ -1.9
VARS2Q5ST30 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
VARS2Q5ST30 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.19□□□□□ -1.9
VARS2Q5ST30 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
VARS2Q5ST30 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VARS2Q5ST30 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VARS2Q5ST30 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VARS2Q5ST30 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VARS2Q5ST30 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
VARS2Q5ST30 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 RNU6-753P-201ENST00000363926 107 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 Y_RNA.588-201ENST00000391254 102 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.18□□□□□ -1.9
VARS2Q5ST30 snoU13.27-201ENST00000459278 104 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 MIR4319-201ENST00000577285 85 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.18□□□□□ -1.9
VARS2Q5ST30 RNU7-10P-201ENST00000607194 63 ntBASIC3.18□□□□□ -1.9
VARS2Q5ST30 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
VARS2Q5ST30 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VARS2Q5ST30 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
VARS2Q5ST30 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
VARS2Q5ST30 MIR548H5-201ENST00000580314 60 ntBASIC3.17□□□□□ -1.9
VARS2Q5ST30 AC106800.4-201ENST00000614905 153 ntBASIC3.17□□□□□ -1.9
VARS2Q5ST30 DLEU2_4.2-201ENST00000616613 58 ntBASIC3.17□□□□□ -1.9
VARS2Q5ST30 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VARS2Q5ST30 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
VARS2Q5ST30 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
VARS2Q5ST30 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARS2Q5ST30 RNU6-1312P-201ENST00000362425 108 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 RNA5SP299-201ENST00000391203 116 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 MIR7843-201ENST00000622274 79 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 AC073869.9-201ENST00000641610 120 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARS2Q5ST30 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VARS2Q5ST30 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
VARS2Q5ST30 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
VARS2Q5ST30 RNA5SP48-201ENST00000363969 126 ntBASIC3.15□□□□□ -1.91
VARS2Q5ST30 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
VARS2Q5ST30 MIR4264-201ENST00000583520 66 ntBASIC3.15□□□□□ -1.91
VARS2Q5ST30 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
VARS2Q5ST30 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VARS2Q5ST30 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VARS2Q5ST30 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VARS2Q5ST30 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VARS2Q5ST30 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
VARS2Q5ST30 MIR597-201ENST00000384968 97 ntBASIC3.14□□□□□ -1.91
VARS2Q5ST30 AC105272.1-201ENST00000438604 198 ntBASIC3.14□□□□□ -1.91
VARS2Q5ST30 AP000942.3-201ENST00000603702 160 ntBASIC3.14□□□□□ -1.91
VARS2Q5ST30 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VARS2Q5ST30 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VARS2Q5ST30 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
VARS2Q5ST30 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
VARS2Q5ST30 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
VARS2Q5ST30 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VARS2Q5ST30 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VARS2Q5ST30 AC016717.2-201ENST00000609089 5141 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
VARS2Q5ST30 MIR101-2-201ENST00000362195 79 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 U3.27-201ENST00000391237 200 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 AC107016.2-201ENST00000547968 190 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 MIR4524B-201ENST00000581569 115 ntBASIC3.13□□□□□ -1.91
VARS2Q5ST30 MIR4769-201ENST00000584126 77 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 269.2 ms