Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Y_RNA.47-201ENST00000362697 108 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 Y_RNA.171-201ENST00000363760 102 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 RNU6-1336P-201ENST00000383886 109 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 Y_RNA.515-201ENST00000384535 112 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 Y_RNA.562-201ENST00000384695 113 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.12□□□□□ -2.39
RFX4Q33E94 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 AC008737.2-201ENST00000599446 118 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 MIR6828-201ENST00000636181 60 ntBASIC0.12□□□□□ -2.39
RFX4Q33E94 RNU6-923P-201ENST00000364753 107 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 RNU6-643P-201ENST00000384018 107 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 Y_RNA.536-201ENST00000384621 113 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 Y_RNA.539-201ENST00000384635 107 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MIR193B-201ENST00000384907 83 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MTND2P23-201ENST00000422990 651 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 SUMO1P3-201ENST00000439961 304 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 AC069271.1-201ENST00000445577 156 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MTND1P19-201ENST00000511780 315 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MRPS18CP4-201ENST00000535821 231 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 MIR6755-201ENST00000619993 66 ntBASIC0.11□□□□□ -2.39
RFX4Q33E94 Y_RNA.145-201ENST00000363527 102 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 Y_RNA.470-201ENST00000384307 117 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 Y_RNA.797-201ENST00000515977 94 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 SNORA62.5-201ENST00000516634 120 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 RNA5SP47-201ENST00000517230 109 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
RFX4Q33E94 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
RFX4Q33E94 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
RFX4Q33E94 Y_RNA.36-201ENST00000362602 112 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 SNORD27-201ENST00000363981 72 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU6-1229P-201ENST00000364295 107 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU6-187P-201ENST00000384139 106 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU6-738P-201ENST00000384531 106 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 Y_RNA.571-201ENST00000384753 98 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
RFX4Q33E94 MIR548H3-201ENST00000408771 118 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNA5SP144-201ENST00000410846 116 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU6-1086P-201ENST00000410930 100 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU5E-9P-201ENST00000411164 104 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 RNU7-79P-201ENST00000516082 62 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 Y_RNA.697-201ENST00000516776 113 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 SCARNA16.5-201ENST00000517114 183 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
RFX4Q33E94 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
RFX4Q33E94 Y_RNA.121-201ENST00000363309 113 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.182-201ENST00000363880 111 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 RNA5SP245-201ENST00000364239 121 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 SNORD28-201ENST00000384706 75 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 RNU6-535P-201ENST00000384722 107 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 SNORD58.1-201ENST00000391313 66 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.812-201ENST00000610788 101 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.784-201ENST00000613803 101 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.787-201ENST00000616522 101 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.780-201ENST00000617336 101 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.801-201ENST00000619005 101 ntBASIC0.08□□□□□ -2.4
RFX4Q33E94 Y_RNA.149-201ENST00000363558 117 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 Y_RNA.288-201ENST00000364854 92 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 RNU6-275P-201ENST00000364910 107 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 RNY1P6-201ENST00000384193 109 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 Y_RNA.477-201ENST00000384352 108 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 MIR568-201ENST00000385036 95 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 Y_RNA.626-201ENST00000411288 95 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 RNA5SP236-201ENST00000516169 116 ntBASIC0.07□□□□□ -2.4
RFX4Q33E94 Y_RNA.52-201ENST00000362760 96 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 Y_RNA.65-201ENST00000362846 100 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 Y_RNA.412-201ENST00000384001 104 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 Y_RNA.459-201ENST00000384251 102 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 RNU4-70P-201ENST00000384579 139 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 RNU6-531P-201ENST00000516694 104 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 MIR1273G-201ENST00000577677 100 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 MIR4639-201ENST00000584938 69 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.06□□□□□ -2.4
RFX4Q33E94 SNORA9.1-201ENST00000362412 131 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 Y_RNA.20-201ENST00000362479 113 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 SNORA63-201ENST00000363450 132 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 SNORA63.5-201ENST00000363548 123 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 SNORA25.7-201ENST00000364375 127 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 Y_RNA.366-201ENST00000365540 102 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 PCNPP3-201ENST00000393579 471 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 Y_RNA.668-201ENST00000516233 93 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 Y_RNA.680-201ENST00000516441 93 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 TUG1_4.1-201ENST00000619464 181 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 AC244669.1-204ENST00000621564 178 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 U6.106-201ENST00000636360 105 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 AC091304.10-201ENST00000641554 121 ntBASIC0.05□□□□□ -2.4
RFX4Q33E94 Y_RNA.120-201ENST00000363304 110 ntBASIC0.04□□□□□ -2.4
RFX4Q33E94 RNA5SP133-201ENST00000363368 119 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms