Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
NFIL3Q16649 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
NFIL3Q16649 RNY1P11-201ENST00000363759 113 ntBASIC0.78□□□□□ -2.28
NFIL3Q16649 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
NFIL3Q16649 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
NFIL3Q16649 AC141846.1-201ENST00000568348 142 ntBASIC0.78□□□□□ -2.28
NFIL3Q16649 Y_RNA.251-201ENST00000364551 99 ntBASIC0.77□□□□□ -2.29
NFIL3Q16649 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.77□□□□□ -2.29
NFIL3Q16649 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
NFIL3Q16649 SNORD92-201ENST00000585078 85 ntBASIC0.77□□□□□ -2.29
NFIL3Q16649 Y_RNA.171-201ENST00000363760 102 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
NFIL3Q16649 Y_RNA.466-201ENST00000384294 113 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 Y_RNA.584-201ENST00000391090 114 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 COX6CP6-201ENST00000490840 228 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 RNU6-794P-201ENST00000517261 64 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.76□□□□□ -2.29
NFIL3Q16649 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.76□□□□□ -2.29
NFIL3Q16649 RNU6-690P-201ENST00000365242 106 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 SNORA18-201ENST00000384416 132 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-342P-201ENST00000384521 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 MIR613-201ENST00000385248 95 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 Y_RNA.580-201ENST00000391004 95 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-447P-201ENST00000410293 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-1118P-201ENST00000410382 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-1076P-201ENST00000410397 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-355P-201ENST00000410427 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-791P-201ENST00000410467 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-705P-201ENST00000410601 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-1100P-201ENST00000410691 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-394P-201ENST00000410735 107 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-860P-201ENST00000410860 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-1217P-201ENST00000411276 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU6-785P-201ENST00000411324 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 RNU7-156P-201ENST00000517214 74 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 U6.90-201ENST00000614007 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 FTX_2.1-201ENST00000618816 94 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 U6.70-201ENST00000620287 104 ntBASIC0.75□□□□□ -2.29
NFIL3Q16649 SNORD115-2-201ENST00000362842 82 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 Y_RNA.120-201ENST00000363304 110 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 SNORD115-20-201ENST00000365099 82 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 SNORD18B-201ENST00000365659 72 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 RNU6-364P-201ENST00000384387 107 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 U8.15-201ENST00000390947 134 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 RNU6-1086P-201ENST00000410930 100 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 AL022718.1-201ENST00000412004 84 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 RNU7-102P-201ENST00000458948 62 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 AC112693.2-201ENST00000556538 232 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 AC008608.1-201ENST00000603910 127 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 AC090425.1-201ENST00000610007 140 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
NFIL3Q16649 RNU6-949P-201ENST00000384040 107 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
NFIL3Q16649 AL603914.1-201ENST00000401964 204 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 SNORD93-201ENST00000408813 74 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 RNU7-113P-201ENST00000459273 62 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 MIR4305-201ENST00000583252 102 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
NFIL3Q16649 RNU4-11P-201ENST00000365287 132 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 RNU6-449P-201ENST00000383914 107 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 Y_RNA.470-201ENST00000384307 117 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 PCNPP3-201ENST00000393579 471 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 RNA5SP222-201ENST00000411039 105 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 RPL39P25-201ENST00000449384 154 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 Y_RNA.651-201ENST00000459380 103 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 RNA5SP480-201ENST00000516840 109 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.72□□□□□ -2.29
NFIL3Q16649 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 Y_RNA.778-201ENST00000620203 90 ntBASIC0.72□□□□□ -2.29
NFIL3Q16649 RNY1P13-201ENST00000365030 105 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 AC096949.1-201ENST00000412047 152 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 AL512326.2-201ENST00000426359 151 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 RNU7-197P-201ENST00000458836 62 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 RNU6-240P-201ENST00000516098 97 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 Y_RNA.686-201ENST00000516548 134 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 RNU7-35P-201ENST00000517174 62 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 AC133485.4-201ENST00000561835 220 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 AC138907.4-201ENST00000570107 226 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 MIR3612-201ENST00000579753 87 ntBASIC0.71□□□□□ -2.3
NFIL3Q16649 RNU6-508P-201ENST00000363231 103 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU6-151P-201ENST00000364158 107 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU6-309P-201ENST00000364573 106 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU6-1130P-201ENST00000365434 107 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU6-886P-201ENST00000384319 105 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU4-83P-201ENST00000410863 133 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU7-79P-201ENST00000516082 62 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 RNU2-35P-201ENST00000516446 142 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 Y_RNA.690-201ENST00000516603 95 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 MIR8066-201ENST00000617280 78 ntBASIC0.7□□□□□ -2.3
NFIL3Q16649 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.7□□□□□ -2.3
NFIL3Q16649 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 278.2 ms