Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-291P-201ENST00000384720 107 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 MIR548H3-201ENST00000408771 118 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 RNU5E-9P-201ENST00000411164 104 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 SNORA25.16-201ENST00000516741 121 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 Y_RNA.697-201ENST00000516776 113 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 AC112693.2-201ENST00000556538 232 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 MTND5P34-201ENST00000568888 325 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 MIR6779-201ENST00000617283 64 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 MTND5P32-201ENST00000560711 1802 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 RNU6-1099P-201ENST00000363533 107 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 RNU6-643P-201ENST00000384018 107 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 Y_RNA.536-201ENST00000384621 113 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 Y_RNA.539-201ENST00000384635 107 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 RNU6-535P-201ENST00000384722 107 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 MIR606-201ENST00000384851 96 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.13□□□□□ -2.39
SCN1BQ07699 RNU6-893P-201ENST00000458841 100 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 AL117187.1-201ENST00000555482 181 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 MIR7107-201ENST00000611489 80 ntBASIC0.13□□□□□ -2.39
SCN1BQ07699 RNU4-67P-201ENST00000364569 141 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 RNU6-923P-201ENST00000364753 107 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 RNA5SP227-201ENST00000516184 113 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 RNU6-135P-201ENST00000516769 101 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 RNU6-1258P-201ENST00000516911 111 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 Y_RNA.757-201ENST00000578934 114 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 AC008737.2-201ENST00000599446 118 ntBASIC0.12□□□□□ -2.39
SCN1BQ07699 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SCN1BQ07699 Y_RNA.47-201ENST00000362697 108 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 Y_RNA.171-201ENST00000363760 102 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 Y_RNA.182-201ENST00000363880 111 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 SNORD27-201ENST00000363981 72 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 Y_RNA.288-201ENST00000364854 92 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 AC069271.1-201ENST00000445577 156 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
SCN1BQ07699 Y_RNA.121-201ENST00000363309 113 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 SNORA63-201ENST00000363450 132 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 Y_RNA.145-201ENST00000363527 102 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 Y_RNA.149-201ENST00000363558 117 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 RNY4P28-201ENST00000365281 93 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 RNY1P6-201ENST00000384193 109 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 RNU6-1086P-201ENST00000410930 100 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 SNORD127-201ENST00000458892 86 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 MTND1P19-201ENST00000511780 315 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 DEFB131E-201ENST00000532329 154 ntBASIC0.1□□□□□ -2.39
SCN1BQ07699 Y_RNA.85-201ENST00000363014 111 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 SNORA25.7-201ENST00000364375 127 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 Y_RNA.571-201ENST00000384753 98 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 RNU6-1194P-201ENST00000516208 104 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.4
SCN1BQ07699 Y_RNA.115-201ENST00000363272 98 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 RNU6-1336P-201ENST00000383886 109 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 Y_RNA.459-201ENST00000384251 102 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 MTND2P23-201ENST00000422990 651 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 RNU7-79P-201ENST00000516082 62 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SCN1BQ07699 MIR4308-201ENST00000580634 81 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 MIR6755-201ENST00000619993 66 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
SCN1BQ07699 Y_RNA.65-201ENST00000362846 100 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.423-201ENST00000384057 113 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 RNU4-70P-201ENST00000384579 139 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 RNA5SP144-201ENST00000410846 116 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 RNU7-113P-201ENST00000459273 62 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.812-201ENST00000610788 101 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.784-201ENST00000613803 101 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.787-201ENST00000616522 101 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.780-201ENST00000617336 101 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 Y_RNA.801-201ENST00000619005 101 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 AC091304.10-201ENST00000641554 121 ntBASIC0.07□□□□□ -2.4
SCN1BQ07699 MIR330-201ENST00000362196 94 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 RNU6-187P-201ENST00000384139 106 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 Y_RNA.470-201ENST00000384307 117 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 Y_RNA.562-201ENST00000384695 113 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 MIR1197-201ENST00000408818 88 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 RNU6-531P-201ENST00000516694 104 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 MRPS18CP4-201ENST00000535821 231 ntBASIC0.06□□□□□ -2.4
SCN1BQ07699 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.06□□□□□ -2.4
SCN1BQ07699 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
SCN1BQ07699 SNORA9.1-201ENST00000362412 131 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 RNA5SP133-201ENST00000363368 119 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 RNU6-275P-201ENST00000364910 107 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 SNORA32-201ENST00000384072 121 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 Y_RNA.477-201ENST00000384352 108 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 Y_RNA.626-201ENST00000411288 95 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 AL022718.1-201ENST00000412004 84 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms