Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 IGKV1-22-201ENST00000524313 326 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 AC141846.1-201ENST00000568348 142 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 AC021443.1-201ENST00000604478 211 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 AL137067.1-201ENST00000615933 120 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
CKAP4Q07065 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 Y_RNA.114-201ENST00000363265 113 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 Y_RNA.298-201ENST00000364960 107 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 Y_RNA.343-201ENST00000365354 112 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 SNORD50.2-201ENST00000365465 70 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 SNORA18-201ENST00000384416 132 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 MTND4LP9-201ENST00000427694 174 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 AC067940.1-201ENST00000458411 300 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 RNU7-164P-201ENST00000459221 62 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 RNA5SP272-201ENST00000516095 111 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 Y_RNA.703-201ENST00000516846 111 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 RNU7-35P-201ENST00000517174 62 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 AC020891.4-201ENST00000605745 93 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 AL136317.1-201ENST00000612653 226 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 MIR6767-201ENST00000637302 66 ntBASIC0.58□□□□□ -2.32
CKAP4Q07065 RNU6-647P-201ENST00000364243 107 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNY1P13-201ENST00000365030 105 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNU6-1335P-201ENST00000365426 107 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNU6-949P-201ENST00000384040 107 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNU6-257P-201ENST00000410238 98 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNA5SP237-201ENST00000410414 113 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 Y_RNA.617-201ENST00000410920 90 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 AC096949.1-201ENST00000412047 152 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 AL158147.1-201ENST00000443970 75 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 RNU7-185P-201ENST00000459215 60 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 MIR4771-2-201ENST00000577758 74 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 MIR4771-1-201ENST00000582617 74 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 MIR4676-201ENST00000583078 72 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 MIR3133-201ENST00000583157 78 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 SNORA4-201ENST00000584302 138 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 AC104984.5-201ENST00000586878 94 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 TUG1_4.1-201ENST00000619464 181 ntBASIC0.57□□□□□ -2.32
CKAP4Q07065 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
CKAP4Q07065 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CKAP4Q07065 Y_RNA.294-201ENST00000364916 102 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 MIR605-201ENST00000385078 83 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 SNORA40-201ENST00000388090 126 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 MIR1270-201ENST00000459320 83 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RNY4P20-201ENST00000516678 93 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RNA5SP33-201ENST00000516687 98 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 MIR6715A-201ENST00000615929 79 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 RMST_2.1-201ENST00000617263 136 ntBASIC0.56□□□□□ -2.32
CKAP4Q07065 AC023934.1-201ENST00000574529 2389 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CKAP4Q07065 Y_RNA.299-201ENST00000364973 94 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 U8.15-201ENST00000390947 134 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 Y_RNA.586-201ENST00000391146 98 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 AC015818.7-201ENST00000428754 109 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 AC087499.7-201ENST00000441958 109 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
CKAP4Q07065 RNU7-56P-201ENST00000458744 62 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 TRMT112P2-201ENST00000512910 132 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 RNU5E-3P-201ENST00000515913 68 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 RN7SKP19-201ENST00000516016 252 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 RNU7-79P-201ENST00000516082 62 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 MIR548AE2-201ENST00000583456 67 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 SNORD92-201ENST00000585078 85 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 AL353765.1-201ENST00000605514 183 ntBASIC0.55□□□□□ -2.32
CKAP4Q07065 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CKAP4Q07065 RNU6-1104P-201ENST00000384723 104 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 MIR613-201ENST00000385248 95 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 MIRLET7F2-201ENST00000385277 83 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 MIR1257-201ENST00000408490 117 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 RNU4-69P-201ENST00000410677 143 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 RNU6-977P-201ENST00000516411 103 ntBASIC0.54□□□□□ -2.32
CKAP4Q07065 RNU6-774P-201ENST00000363238 107 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 RNU6-704P-201ENST00000364162 103 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CKAP4Q07065 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CKAP4Q07065 MIR520F-201ENST00000384824 87 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 Y_RNA.588-201ENST00000391254 102 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 RNA5SP136-201ENST00000410906 107 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.53□□□□□ -2.32
CKAP4Q07065 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 AC022523.2-201ENST00000561045 150 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 MIR8066-201ENST00000617280 78 ntBASIC0.53□□□□□ -2.32
CKAP4Q07065 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
CKAP4Q07065 Y_RNA.42-201ENST00000362660 108 ntBASIC0.52□□□□□ -2.33
CKAP4Q07065 MIR539-201ENST00000365690 78 ntBASIC0.52□□□□□ -2.33
CKAP4Q07065 SNORA32-201ENST00000384072 121 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms