Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPS23P4-201ENST00000487908 423 ntBASIC1.32□□□□□ -2.2
LTBQ06643 AC113410.1-201ENST00000505029 247 ntBASIC1.32□□□□□ -2.2
LTBQ06643 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
LTBQ06643 MIR3163-201ENST00000581592 73 ntBASIC1.32□□□□□ -2.2
LTBQ06643 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.32□□□□□ -2.2
LTBQ06643 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
LTBQ06643 Z97988.1-201ENST00000637697 135 ntBASIC1.32□□□□□ -2.2
LTBQ06643 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LTBQ06643 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LTBQ06643 SNORA1.1-201ENST00000364671 133 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RNU6-147P-201ENST00000383983 107 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RNU6-106P-201ENST00000384405 107 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RNA5SP261-201ENST00000410536 106 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RPS3AP1-201ENST00000413190 320 ntBASIC1.31□□□□□ -2.2
LTBQ06643 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
LTBQ06643 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
LTBQ06643 MIR1270-201ENST00000459320 83 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RNU6-412P-201ENST00000516434 106 ntBASIC1.31□□□□□ -2.2
LTBQ06643 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
LTBQ06643 MIR548AE2-201ENST00000583456 67 ntBASIC1.31□□□□□ -2.2
LTBQ06643 Y_RNA.773-201ENST00000607168 90 ntBASIC1.31□□□□□ -2.2
LTBQ06643 uc_338.28-201ENST00000612082 187 ntBASIC1.31□□□□□ -2.2
LTBQ06643 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
LTBQ06643 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
LTBQ06643 RNU6-554P-201ENST00000410466 106 ntBASIC1.3□□□□□ -2.2
LTBQ06643 RNU6-602P-201ENST00000411155 105 ntBASIC1.3□□□□□ -2.2
LTBQ06643 RNU6-893P-201ENST00000458841 100 ntBASIC1.3□□□□□ -2.2
LTBQ06643 RPS29P1-201ENST00000465274 159 ntBASIC1.3□□□□□ -2.2
LTBQ06643 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
LTBQ06643 RNA5SP33-201ENST00000516687 98 ntBASIC1.3□□□□□ -2.2
LTBQ06643 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.3□□□□□ -2.2
LTBQ06643 AC019176.1-201ENST00000518519 225 ntBASIC1.3□□□□□ -2.2
LTBQ06643 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
LTBQ06643 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.3□□□□□ -2.2
LTBQ06643 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
LTBQ06643 AL589743.1-201ENST00000551932 2712 ntBASIC1.3□□□□□ -2.2
LTBQ06643 MIR450A1-201ENST00000362262 91 ntBASIC1.29□□□□□ -2.2
LTBQ06643 Y_RNA.30-201ENST00000362572 97 ntBASIC1.29□□□□□ -2.2
LTBQ06643 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
LTBQ06643 SNORA25.3-201ENST00000363205 127 ntBASIC1.29□□□□□ -2.2
LTBQ06643 U8.6-201ENST00000364939 135 ntBASIC1.29□□□□□ -2.2
LTBQ06643 MIR1302-7-201ENST00000408841 72 ntBASIC1.29□□□□□ -2.2
LTBQ06643 RNU4-69P-201ENST00000410677 143 ntBASIC1.29□□□□□ -2.2
LTBQ06643 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.29□□□□□ -2.2
LTBQ06643 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
LTBQ06643 MIR3613-201ENST00000579844 87 ntBASIC1.29□□□□□ -2.2
LTBQ06643 PRELID3BP2-201ENST00000605362 201 ntBASIC1.29□□□□□ -2.2
LTBQ06643 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LTBQ06643 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LTBQ06643 RNU6-1014P-201ENST00000383940 103 ntBASIC1.28□□□□□ -2.2
LTBQ06643 SNORA32-201ENST00000384072 121 ntBASIC1.28□□□□□ -2.2
LTBQ06643 MIR520E-201ENST00000384867 87 ntBASIC1.28□□□□□ -2.2
LTBQ06643 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
LTBQ06643 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
LTBQ06643 RNU6-970P-201ENST00000516312 107 ntBASIC1.28□□□□□ -2.2
LTBQ06643 AC068339.1-201ENST00000526965 141 ntBASIC1.28□□□□□ -2.2
LTBQ06643 MIR5009-201ENST00000578736 100 ntBASIC1.28□□□□□ -2.2
LTBQ06643 MIR151B-201ENST00000584249 96 ntBASIC1.28□□□□□ -2.2
LTBQ06643 AL357312.1-201ENST00000603879 298 ntBASIC1.28□□□□□ -2.2
LTBQ06643 RNU6-94P-201ENST00000607728 107 ntBASIC1.28□□□□□ -2.2
LTBQ06643 MIR1255B1-201ENST00000636325 63 ntBASIC1.28□□□□□ -2.2
LTBQ06643 Y_RNA.299-201ENST00000364973 94 ntBASIC1.27□□□□□ -2.21
LTBQ06643 Y_RNA.323-201ENST00000365157 109 ntBASIC1.27□□□□□ -2.21
LTBQ06643 AC244023.1-201ENST00000426884 112 ntBASIC1.27□□□□□ -2.21
LTBQ06643 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
LTBQ06643 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
LTBQ06643 RPL39P34-201ENST00000477141 156 ntBASIC1.27□□□□□ -2.21
LTBQ06643 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
LTBQ06643 AC242498.1-201ENST00000604134 111 ntBASIC1.27□□□□□ -2.21
LTBQ06643 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
LTBQ06643 Y_RNA.49-201ENST00000362714 112 ntBASIC1.26□□□□□ -2.21
LTBQ06643 SNORD115-19-201ENST00000363098 82 ntBASIC1.26□□□□□ -2.21
LTBQ06643 SNORD115-18-201ENST00000363293 82 ntBASIC1.26□□□□□ -2.21
LTBQ06643 Y_RNA.163-201ENST00000363702 113 ntBASIC1.26□□□□□ -2.21
LTBQ06643 SNORD115-17-201ENST00000364612 82 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU1-93P-201ENST00000364704 169 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6-616P-201ENST00000384353 107 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6-816P-201ENST00000390914 107 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6-1268P-201ENST00000391214 107 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6-1239P-201ENST00000391310 107 ntBASIC1.26□□□□□ -2.21
LTBQ06643 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
LTBQ06643 AP003716.2-201ENST00000528260 108 ntBASIC1.26□□□□□ -2.21
LTBQ06643 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
LTBQ06643 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
LTBQ06643 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.26□□□□□ -2.21
LTBQ06643 AL162726.3-218ENST00000636401 95 ntBASIC1.26□□□□□ -2.21
LTBQ06643 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
LTBQ06643 SNORA18-201ENST00000384416 132 ntBASIC1.25□□□□□ -2.21
LTBQ06643 SNORD38B-201ENST00000384690 67 ntBASIC1.25□□□□□ -2.21
LTBQ06643 AL031737.1-201ENST00000450125 223 ntBASIC1.25□□□□□ -2.21
LTBQ06643 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
LTBQ06643 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
LTBQ06643 MIR3937-201ENST00000580135 106 ntBASIC1.25□□□□□ -2.21
LTBQ06643 SNORD38B-202ENST00000625943 69 ntBASIC1.25□□□□□ -2.21
LTBQ06643 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LTBQ06643 RNU6-1237P-201ENST00000384777 107 ntBASIC1.24□□□□□ -2.21
LTBQ06643 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
LTBQ06643 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms