Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 MIR6740-201ENST00000618268 113 ntBASIC1.38□□□□□ -2.19
CDC42EP1Q00587 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42EP1Q00587 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 MIR548I2-201ENST00000408348 149 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 AC023827.1-201ENST00000569247 97 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 MIR548AI-201ENST00000579940 88 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 MIR3163-201ENST00000581592 73 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.168-201ENST00000363740 102 ntBASIC1.36□□□□□ -2.19
CDC42EP1Q00587 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.563-201ENST00000384707 108 ntBASIC1.36□□□□□ -2.19
CDC42EP1Q00587 RNU4-69P-201ENST00000410677 143 ntBASIC1.36□□□□□ -2.19
CDC42EP1Q00587 SNORD113.3-201ENST00000364630 78 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 SNORA25.9-201ENST00000365087 128 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 MIR548A3-201ENST00000385297 97 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 MT-TI-201ENST00000387365 69 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 RNU6-1165P-201ENST00000410119 107 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.649-201ENST00000459077 103 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 RNU7-6P-201ENST00000516845 62 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 AL662814.1-201ENST00000617364 121 ntBASIC1.35□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.226-201ENST00000364337 114 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.291-201ENST00000364886 113 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 Y_RNA.353-201ENST00000365440 108 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 MIR499A-201ENST00000384903 122 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CDC42EP1Q00587 SNORD77B-201ENST00000391112 67 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 MTND5P34-201ENST00000568888 325 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 AL670379.3-201ENST00000605040 251 ntBASIC1.34□□□□□ -2.19
CDC42EP1Q00587 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 RNU6-580P-201ENST00000365159 107 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 RNU6-735P-201ENST00000410612 107 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 AC063976.4-201ENST00000421971 163 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
CDC42EP1Q00587 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42EP1Q00587 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42EP1Q00587 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 MIR548A1-201ENST00000385041 97 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 MIR563-201ENST00000385080 79 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 SNORD111-201ENST00000408139 94 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 MIR1287-201ENST00000408492 90 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 MIR1276-201ENST00000408707 83 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 RNU7-79P-201ENST00000516082 62 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 RNU7-35P-201ENST00000517174 62 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 AC141846.1-201ENST00000568348 142 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 uc_338.6-201ENST00000613544 171 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 AC012676.2-201ENST00000619258 186 ntBASIC1.32□□□□□ -2.2
CDC42EP1Q00587 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CDC42EP1Q00587 RNY4P6-201ENST00000363667 96 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 RNU6-994P-201ENST00000410507 111 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 RPL39P25-201ENST00000449384 154 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
CDC42EP1Q00587 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 MIR548D2-201ENST00000384955 97 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 MIR1270-201ENST00000459320 83 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 snoU13.21-201ENST00000459368 105 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
CDC42EP1Q00587 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42EP1Q00587 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CDC42EP1Q00587 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDC42EP1Q00587 MIR30D-201ENST00000362283 70 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 RNY1P13-201ENST00000365030 105 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 RNU6-1056P-201ENST00000383996 107 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 RNU6-476P-201ENST00000384726 107 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 RNU6-1064P-201ENST00000410626 104 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
CDC42EP1Q00587 RNU6-1144P-201ENST00000384247 104 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 AC007012.1-201ENST00000567192 175 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 FAM71BP1-201ENST00000604431 523 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 AC087741.2-201ENST00000619415 172 ntBASIC1.28□□□□□ -2.2
CDC42EP1Q00587 RNU6-834P-201ENST00000362367 110 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 RNU6-1290P-201ENST00000362957 109 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 Y_RNA.273-201ENST00000364703 102 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 RNU6-949P-201ENST00000384040 107 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 SNORD116-21-201ENST00000384507 92 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42EP1Q00587 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 SNORD67.1-201ENST00000516618 108 ntBASIC1.27□□□□□ -2.21
CDC42EP1Q00587 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms