Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.08□□□□□ -2.42
IRX3P78415 MIR3129-201ENST00000581095 76 ntBASIC-0.08□□□□□ -2.42
IRX3P78415 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.08□□□□□ -2.42
IRX3P78415 AL360085.1-201ENST00000604713 532 ntBASIC-0.08□□□□□ -2.42
IRX3P78415 MIR7107-201ENST00000611489 80 ntBASIC-0.08□□□□□ -2.42
IRX3P78415 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
IRX3P78415 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 RNU4-70P-201ENST00000384579 139 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 RNU6-535P-201ENST00000384722 107 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 AP001094.1-201ENST00000579805 193 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 MIR4680-201ENST00000580906 66 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 U2.14-201ENST00000615943 113 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
IRX3P78415 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
IRX3P78415 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU4-17P-201ENST00000365598 141 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU6-291P-201ENST00000384720 107 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU6-381P-201ENST00000391259 108 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU7-45P-201ENST00000459460 63 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.1□□□□□ -2.43
IRX3P78415 U7.6-201ENST00000610841 64 ntBASIC-0.1□□□□□ -2.43
IRX3P78415 RNU4-58P-201ENST00000363192 141 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 RNU6-806P-201ENST00000365147 105 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 MIR624-201ENST00000385217 97 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 RNU6-985P-201ENST00000410182 104 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.11□□□□□ -2.43
IRX3P78415 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 MIR4636-201ENST00000582271 80 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 RNU1-29P-201ENST00000606574 126 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 AL365265.1-201ENST00000621045 234 ntBASIC-0.11□□□□□ -2.43
IRX3P78415 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 RNY1P13-201ENST00000365030 105 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 SNORA18-201ENST00000384416 132 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 SNORA72.6-201ENST00000384520 129 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 RNU6-713P-201ENST00000384761 107 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 SUMO1P3-201ENST00000439961 304 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 MTATP6P23-201ENST00000440153 476 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 RNU6-453P-201ENST00000516819 85 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 RNU6-782P-201ENST00000516852 104 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 MIR5706-201ENST00000579841 80 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 MIR378D2-201ENST00000580636 98 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 MIR376A2-201ENST00000636782 80 ntBASIC-0.12□□□□□ -2.43
IRX3P78415 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 MIR1912-201ENST00000410389 80 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 AC096949.1-201ENST00000412047 152 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 RNU7-129P-201ENST00000516128 62 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 MIR5589-201ENST00000579442 60 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 MIR4802-201ENST00000581881 80 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 AC244669.1-204ENST00000621564 178 ntBASIC-0.13□□□□□ -2.43
IRX3P78415 MIR760-201ENST00000390220 80 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 RNU6-269P-201ENST00000391077 97 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 MIR4744-201ENST00000581563 82 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 MIR3171-201ENST00000584270 74 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 MIR6086-201ENST00000638065 55 ntBASIC-0.14□□□□□ -2.43
IRX3P78415 MTND4P29-201ENST00000503122 1372 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 RNU6-639P-201ENST00000384074 107 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 RNU6V-201ENST00000384105 107 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 RNU7-79P-201ENST00000516082 62 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 RNU7-35P-201ENST00000517174 62 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.15□□□□□ -2.43
IRX3P78415 RNU7-10P-201ENST00000607194 63 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.15□□□□□ -2.43
IRX3P78415 MIR101-2-201ENST00000362195 79 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 SNORD115-2-201ENST00000362842 82 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 RNU6-978P-201ENST00000364371 103 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 SNORD115-20-201ENST00000365099 82 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 AL121914.1-201ENST00000450188 156 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 SCARNA15-202ENST00000516881 127 ntBASIC-0.16□□□□□ -2.44
IRX3P78415 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 RNU6-597P-201ENST00000365620 102 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 RNY1P6-201ENST00000384193 109 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 MTND4LP11-201ENST00000422184 280 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 DEFB131E-201ENST00000532329 154 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 AC011921.3-201ENST00000605540 361 ntBASIC-0.17□□□□□ -2.44
IRX3P78415 AC098479.1-201ENST00000609225 154 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 281.7 ms