Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNY1P11-201ENST00000363759 113 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNU6-682P-201ENST00000363843 106 ntBASIC0.51□□□□□ -2.33
PEX3P56589 Y_RNA.521-201ENST00000384560 114 ntBASIC0.51□□□□□ -2.33
PEX3P56589 SNORA20-201ENST00000384662 132 ntBASIC0.51□□□□□ -2.33
PEX3P56589 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.51□□□□□ -2.33
PEX3P56589 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNU7-120P-201ENST00000459334 63 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNU6-388P-201ENST00000517012 105 ntBASIC0.51□□□□□ -2.33
PEX3P56589 RNU6-389P-201ENST00000517048 105 ntBASIC0.51□□□□□ -2.33
PEX3P56589 MIR3646-201ENST00000578301 84 ntBASIC0.51□□□□□ -2.33
PEX3P56589 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.51□□□□□ -2.33
PEX3P56589 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
PEX3P56589 Y_RNA.337-201ENST00000365312 102 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU4-45P-201ENST00000365469 141 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU6-949P-201ENST00000384040 107 ntBASIC0.5□□□□□ -2.33
PEX3P56589 Y_RNA.441-201ENST00000384123 112 ntBASIC0.5□□□□□ -2.33
PEX3P56589 Y_RNA.497-201ENST00000384447 98 ntBASIC0.5□□□□□ -2.33
PEX3P56589 Y_RNA.552-201ENST00000384665 112 ntBASIC0.5□□□□□ -2.33
PEX3P56589 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU6-239P-201ENST00000390990 99 ntBASIC0.5□□□□□ -2.33
PEX3P56589 Y_RNA.588-201ENST00000391254 102 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU7-70P-201ENST00000516941 66 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU7-156P-201ENST00000517214 74 ntBASIC0.5□□□□□ -2.33
PEX3P56589 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.5□□□□□ -2.33
PEX3P56589 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
PEX3P56589 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
PEX3P56589 RNU6-342P-201ENST00000384521 104 ntBASIC0.49□□□□□ -2.33
PEX3P56589 Y_RNA.515-201ENST00000384535 112 ntBASIC0.49□□□□□ -2.33
PEX3P56589 MIR489-201ENST00000384923 84 ntBASIC0.49□□□□□ -2.33
PEX3P56589 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
PEX3P56589 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
PEX3P56589 AC002350.1-201ENST00000490759 375 ntBASIC0.49□□□□□ -2.33
PEX3P56589 Y_RNA.700-201ENST00000516806 100 ntBASIC0.49□□□□□ -2.33
PEX3P56589 AP002392.1-201ENST00000537692 208 ntBASIC0.49□□□□□ -2.33
PEX3P56589 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
PEX3P56589 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.49□□□□□ -2.33
PEX3P56589 MIR3658-201ENST00000636291 56 ntBASIC0.49□□□□□ -2.33
PEX3P56589 SNORD115-2-201ENST00000362842 82 ntBASIC0.48□□□□□ -2.33
PEX3P56589 Y_RNA.171-201ENST00000363760 102 ntBASIC0.48□□□□□ -2.33
PEX3P56589 RNU6-818P-201ENST00000364837 108 ntBASIC0.48□□□□□ -2.33
PEX3P56589 RNY1P13-201ENST00000365030 105 ntBASIC0.48□□□□□ -2.33
PEX3P56589 SNORD115-20-201ENST00000365099 82 ntBASIC0.48□□□□□ -2.33
PEX3P56589 Y_RNA.785-201ENST00000384290 109 ntBASIC0.48□□□□□ -2.33
PEX3P56589 SNORA18-201ENST00000384416 132 ntBASIC0.48□□□□□ -2.33
PEX3P56589 RNU6-1086P-201ENST00000410930 100 ntBASIC0.48□□□□□ -2.33
PEX3P56589 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
PEX3P56589 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
PEX3P56589 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
PEX3P56589 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.48□□□□□ -2.33
PEX3P56589 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
PEX3P56589 Y_RNA.251-201ENST00000364551 99 ntBASIC0.47□□□□□ -2.33
PEX3P56589 Y_RNA.470-201ENST00000384307 117 ntBASIC0.47□□□□□ -2.33
PEX3P56589 Y_RNA.476-201ENST00000384347 108 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-447P-201ENST00000410293 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-1118P-201ENST00000410382 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-1076P-201ENST00000410397 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNA5SP237-201ENST00000410414 113 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-355P-201ENST00000410427 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-791P-201ENST00000410467 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-705P-201ENST00000410601 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-1100P-201ENST00000410691 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-860P-201ENST00000410860 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 Y_RNA.793-201ENST00000411222 111 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-1217P-201ENST00000411276 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-785P-201ENST00000411324 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU6-893P-201ENST00000458841 100 ntBASIC0.47□□□□□ -2.33
PEX3P56589 RNU7-35P-201ENST00000517174 62 ntBASIC0.47□□□□□ -2.33
PEX3P56589 AP003327.1-201ENST00000529684 127 ntBASIC0.47□□□□□ -2.33
PEX3P56589 AC011603.4-201ENST00000611325 277 ntBASIC0.47□□□□□ -2.33
PEX3P56589 U6.90-201ENST00000614007 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 U6.70-201ENST00000620287 104 ntBASIC0.47□□□□□ -2.33
PEX3P56589 MIR598-201ENST00000384868 97 ntBASIC0.46□□□□□ -2.34
PEX3P56589 RNU6-1135P-201ENST00000411083 103 ntBASIC0.46□□□□□ -2.34
PEX3P56589 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
PEX3P56589 RNU6-861P-201ENST00000516745 106 ntBASIC0.46□□□□□ -2.34
PEX3P56589 RNU6-448P-201ENST00000517052 107 ntBASIC0.46□□□□□ -2.34
PEX3P56589 Y_RNA.120-201ENST00000363304 110 ntBASIC0.45□□□□□ -2.34
PEX3P56589 Y_RNA.257-201ENST00000364596 102 ntBASIC0.45□□□□□ -2.34
PEX3P56589 RNU6-1318P-201ENST00000365389 103 ntBASIC0.45□□□□□ -2.34
PEX3P56589 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
PEX3P56589 SNORD93-201ENST00000408813 74 ntBASIC0.45□□□□□ -2.34
PEX3P56589 RNU6-588P-201ENST00000410281 105 ntBASIC0.45□□□□□ -2.34
PEX3P56589 RNU4-83P-201ENST00000410863 133 ntBASIC0.45□□□□□ -2.34
PEX3P56589 Y_RNA.651-201ENST00000459380 103 ntBASIC0.45□□□□□ -2.34
PEX3P56589 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
PEX3P56589 DNAJC19P2-201ENST00000593340 302 ntBASIC0.45□□□□□ -2.34
PEX3P56589 PVT1_3.1-201ENST00000620853 95 ntBASIC0.45□□□□□ -2.34
PEX3P56589 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
PEX3P56589 MIR6844-201ENST00000637122 62 ntBASIC0.45□□□□□ -2.34
PEX3P56589 Y_RNA.29-201ENST00000362570 113 ntBASIC0.44□□□□□ -2.34
PEX3P56589 Y_RNA.357-201ENST00000365487 109 ntBASIC0.44□□□□□ -2.34
PEX3P56589 MIR1270-201ENST00000459320 83 ntBASIC0.44□□□□□ -2.34
PEX3P56589 RNU2-35P-201ENST00000516446 142 ntBASIC0.44□□□□□ -2.34
PEX3P56589 SNORA81.3-201ENST00000517283 198 ntBASIC0.44□□□□□ -2.34
PEX3P56589 MIR4491-201ENST00000581087 68 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms