Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNA5SP245-201ENST00000364239 121 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 RNA5SP127-201ENST00000411051 133 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 AL121914.1-201ENST00000450188 156 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR378D2-201ENST00000580636 98 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR4744-201ENST00000581563 82 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR8087-201ENST00000612745 78 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR6718-201ENST00000616153 80 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR8062-201ENST00000621515 85 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
PKNOX1P55347 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 MIR489-201ENST00000384923 84 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 MIR624-201ENST00000385217 97 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PKNOX1P55347 RNU6-635P-201ENST00000516651 102 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 RNU1-29P-201ENST00000606574 126 ntBASIC-0.06□□□□□ -2.42
PKNOX1P55347 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.06□□□□□ -2.42
PKNOX1P55347 MIR330-201ENST00000362196 94 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 SNORD114-5-201ENST00000362928 70 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-472P-201ENST00000384299 107 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 MTATP8P1-201ENST00000467115 207 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-848P-201ENST00000515948 107 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU7-79P-201ENST00000516082 62 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-617P-201ENST00000516147 107 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-473P-201ENST00000516164 107 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 RNU6-531P-201ENST00000516694 104 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 MIR4752-201ENST00000579672 72 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
PKNOX1P55347 SNORA63.5-201ENST00000363548 123 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU6-578P-201ENST00000390980 103 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 MIR1302-6-201ENST00000408466 90 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 AL358176.2-201ENST00000425769 204 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU6-893P-201ENST00000458841 100 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU7-129P-201ENST00000516128 62 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU7-35P-201ENST00000517174 62 ntBASIC-0.08□□□□□ -2.42
PKNOX1P55347 RNU6-238P-201ENST00000363313 106 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 RNA5SP128-201ENST00000365305 116 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 SNORA2A-201ENST00000383885 135 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
PKNOX1P55347 RNA5SP144-201ENST00000410846 116 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 RNY3P16-201ENST00000516338 101 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 AP003072.1-201ENST00000531740 145 ntBASIC-0.09□□□□□ -2.42
PKNOX1P55347 RNA5SP133-201ENST00000363368 119 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 RNY1P6-201ENST00000384193 109 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 MIR643-201ENST00000385267 97 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 MIR548H2-201ENST00000408874 88 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 DEFB131E-201ENST00000532329 154 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.1□□□□□ -2.43
PKNOX1P55347 RNU6-797P-201ENST00000363101 109 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 RNU4-58P-201ENST00000363192 141 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 SNORD114-26-201ENST00000363543 72 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 MIR1197-201ENST00000408818 88 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 RNA5SP480-201ENST00000516840 109 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 AC141557.1-201ENST00000540982 400 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 MIR4305-201ENST00000583252 102 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 AC044792.1-201ENST00000593294 196 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 RNU2-4P-201ENST00000606190 192 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 U6.109-201ENST00000636749 87 ntBASIC-0.11□□□□□ -2.43
PKNOX1P55347 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 MIR610-201ENST00000385139 96 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 AC138749.4-201ENST00000563970 127 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 MIR5190-201ENST00000581537 80 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 MIR499B-201ENST00000636498 73 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 U6.104-201ENST00000637979 90 ntBASIC-0.12□□□□□ -2.43
PKNOX1P55347 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 RNA5SP325-201ENST00000363756 130 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 RNU6-643P-201ENST00000384018 107 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 RNU6-493P-201ENST00000391321 108 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 MIR548F4-201ENST00000408515 105 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 AC108059.2-201ENST00000434626 151 ntBASIC-0.13□□□□□ -2.43
PKNOX1P55347 RNU7-113P-201ENST00000459273 62 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms