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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
Y_RNA.757-201
ENST00000578934
114 nt
BASIC
0.52
□□□□□ -2.33
CDH13
P55290
RNU6-349P-201
ENST00000362402
107 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
Y_RNA.297-201
ENST00000364950
91 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
RNU6-949P-201
ENST00000384040
107 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
Y_RNA.552-201
ENST00000384665
112 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
RNU4-83P-201
ENST00000410863
133 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
AP003327.1-201
ENST00000529684
127 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
AC011603.4-201
ENST00000611325
277 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
MIR8066-201
ENST00000617280
78 nt
BASIC
0.51
□□□□□ -2.33
CDH13
P55290
Y_RNA.42-201
ENST00000362660
108 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNA5SP499-201
ENST00000363982
119 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNU6-1082P-201
ENST00000364574
107 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNU4-16P-201
ENST00000364737
141 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
Y_RNA.357-201
ENST00000365487
109 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNU6-1336P-201
ENST00000383886
109 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNY1P8-201
ENST00000383970
114 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
SNORA18-201
ENST00000384416
132 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
U8.15-201
ENST00000390947
134 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNU6-239P-201
ENST00000390990
99 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
CPEB3_ribozyme.1-201
ENST00000408115
78 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNA5SP144-201
ENST00000410846
116 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
HOXA11-AS1_6.1-201
ENST00000620092
179 nt
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
HECTD2-202
ENST00000371667
4354 nt
TSL 1 (best)
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
SAMD9-203
ENST00000620985
6754 nt
APPRIS P1
TSL 2
BASIC
0.5
□□□□□ -2.33
CDH13
P55290
RNU6-379P-201
ENST00000363813
104 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
AL022718.1-201
ENST00000412004
84 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
MTATP6P21-201
ENST00000440681
189 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
snoU13.18-201
ENST00000459483
104 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
RNU7-121P-201
ENST00000516604
62 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
RNU6-765P-201
ENST00000516916
99 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
MIR6844-201
ENST00000637122
62 nt
BASIC
0.49
□□□□□ -2.33
CDH13
P55290
SNORD115-2-201
ENST00000362842
82 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNU6-200P-201
ENST00000364743
107 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
SNORD115-20-201
ENST00000365099
82 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNA5SP117-201
ENST00000365294
118 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNU6-1318P-201
ENST00000365389
103 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNU6-342P-201
ENST00000384521
104 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
Y_RNA.793-201
ENST00000411222
111 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
Y_RNA.700-201
ENST00000516806
100 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNU6-1258P-201
ENST00000516911
111 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
HOTAIRM1_4.1-201
ENST00000617934
102 nt
BASIC
0.48
□□□□□ -2.33
CDH13
P55290
RNA5SP347-201
ENST00000362445
119 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
RNU4-84P-201
ENST00000364200
139 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
Y_RNA.240-201
ENST00000364469
95 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
Y_RNA.476-201
ENST00000384347
108 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
Y_RNA.588-201
ENST00000391254
102 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
AC022559.1-201
ENST00000520905
205 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
AP002392.1-201
ENST00000537692
208 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
MIR6082-201
ENST00000613604
109 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
CLRN1-AS1.1-201
ENST00000615643
79 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
AC022709.1-201
ENST00000615967
87 nt
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
ZNF654-201
ENST00000309495
4957 nt
APPRIS P2
TSL 1 (best)
BASIC
0.47
□□□□□ -2.33
CDH13
P55290
Y_RNA.171-201
ENST00000363760
102 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
RNY1P13-201
ENST00000365030
105 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
Y_RNA.497-201
ENST00000384447
98 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
AC096949.1-201
ENST00000412047
152 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
RNU7-113P-201
ENST00000459273
62 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
RNU7-35P-201
ENST00000517174
62 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
MIR4491-201
ENST00000581087
68 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
AC092634.7-201
ENST00000621022
103 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
uc_338.16-201
ENST00000621804
95 nt
BASIC
0.46
□□□□□ -2.34
CDH13
P55290
RNU6-403P-201
ENST00000363163
104 nt
BASIC
0.45
□□□□□ -2.34
CDH13
P55290
RNU6-690P-201
ENST00000365242
106 nt
BASIC
0.45
□□□□□ -2.34
CDH13
P55290
RNU6ATAC23P-201
ENST00000408448
123 nt
BASIC
0.45
□□□□□ -2.34
CDH13
P55290
RNU7-120P-201
ENST00000459334
63 nt
BASIC
0.45
□□□□□ -2.34
CDH13
P55290
MIR5087-201
ENST00000635826
76 nt
BASIC
0.45
□□□□□ -2.34
CDH13
P55290
Y_RNA.13-201
ENST00000362403
112 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
SNORD18A-201
ENST00000363753
72 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
Y_RNA.355-201
ENST00000365462
98 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
Y_RNA.441-201
ENST00000384123
112 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
Y_RNA.508-201
ENST00000384502
114 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
AC098934.3-201
ENST00000430450
190 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
AC092628.1-201
ENST00000436250
252 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
RNU7-79P-201
ENST00000516082
62 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
DNAJC19P2-201
ENST00000593340
302 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
AC078938.1-201
ENST00000620993
318 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
MIR6513-201
ENST00000621188
64 nt
BASIC
0.44
□□□□□ -2.34
CDH13
P55290
Y_RNA.120-201
ENST00000363304
110 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-679P-201
ENST00000391003
106 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-588P-201
ENST00000410281
105 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-1135P-201
ENST00000411083
103 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-229P-201
ENST00000516614
102 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNA5SP94-201
ENST00000516917
108 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-388P-201
ENST00000517012
105 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
RNU6-389P-201
ENST00000517048
105 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
MIR3678-201
ENST00000578455
94 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
MIR4305-201
ENST00000583252
102 nt
BASIC
0.43
□□□□□ -2.34
CDH13
P55290
Y_RNA.29-201
ENST00000362570
113 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
Y_RNA.118-201
ENST00000363300
101 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
Y_RNA.174-201
ENST00000363781
105 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
Y_RNA.470-201
ENST00000384307
117 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
snosnR66.1-201
ENST00000391095
99 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
AC114737.2-201
ENST00000421583
173 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
RNU6-138P-201
ENST00000515952
107 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
RNU6-1194P-201
ENST00000516208
104 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
RNA5SP33-201
ENST00000516687
98 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
RNU6-135P-201
ENST00000516769
101 nt
BASIC
0.42
□□□□□ -2.34
CDH13
P55290
AC090625.1-201
ENST00000357130
210 nt
BASIC
0.41
□□□□□ -2.34
CDH13
P55290
SNORD18B-201
ENST00000365659
72 nt
BASIC
0.41
□□□□□ -2.34
CDH13
P55290
Y_RNA.531-201
ENST00000384589
121 nt
BASIC
0.41
□□□□□ -2.34
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