Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
PDX1P52945 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
PDX1P52945 Y_RNA.171-201ENST00000363760 102 ntBASIC0.72□□□□□ -2.29
PDX1P52945 RNU6-1130P-201ENST00000365434 107 ntBASIC0.72□□□□□ -2.29
PDX1P52945 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
PDX1P52945 SNORD37.2-201ENST00000391075 66 ntBASIC0.72□□□□□ -2.29
PDX1P52945 PCNPP3-201ENST00000393579 471 ntBASIC0.72□□□□□ -2.29
PDX1P52945 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
PDX1P52945 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
PDX1P52945 RNU6-977P-201ENST00000516411 103 ntBASIC0.72□□□□□ -2.29
PDX1P52945 Y_RNA.757-201ENST00000578934 114 ntBASIC0.72□□□□□ -2.29
PDX1P52945 MIR3152-201ENST00000579801 74 ntBASIC0.72□□□□□ -2.29
PDX1P52945 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
PDX1P52945 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.72□□□□□ -2.29
PDX1P52945 AL136317.1-201ENST00000612653 226 ntBASIC0.72□□□□□ -2.29
PDX1P52945 Y_RNA.150-201ENST00000363562 102 ntBASIC0.71□□□□□ -2.3
PDX1P52945 RNU4-11P-201ENST00000365287 132 ntBASIC0.71□□□□□ -2.3
PDX1P52945 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
PDX1P52945 MT-TF-201ENST00000387314 71 ntBASIC0.71□□□□□ -2.3
PDX1P52945 MIR1257-201ENST00000408490 117 ntBASIC0.71□□□□□ -2.3
PDX1P52945 RNA5SP144-201ENST00000410846 116 ntBASIC0.71□□□□□ -2.3
PDX1P52945 RNU7-185P-201ENST00000459215 60 ntBASIC0.71□□□□□ -2.3
PDX1P52945 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
PDX1P52945 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
PDX1P52945 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
PDX1P52945 Y_RNA.251-201ENST00000364551 99 ntBASIC0.7□□□□□ -2.3
PDX1P52945 RNA5SP237-201ENST00000410414 113 ntBASIC0.7□□□□□ -2.3
PDX1P52945 Y_RNA.686-201ENST00000516548 134 ntBASIC0.7□□□□□ -2.3
PDX1P52945 AC008608.1-201ENST00000603910 127 ntBASIC0.7□□□□□ -2.3
PDX1P52945 FTX_2.1-201ENST00000618816 94 ntBASIC0.7□□□□□ -2.3
PDX1P52945 RNU6-690P-201ENST00000365242 106 ntBASIC0.69□□□□□ -2.3
PDX1P52945 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PDX1P52945 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PDX1P52945 SNORD116-18-201ENST00000383961 92 ntBASIC0.69□□□□□ -2.3
PDX1P52945 SNORA18-201ENST00000384416 132 ntBASIC0.69□□□□□ -2.3
PDX1P52945 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
PDX1P52945 MIR936-201ENST00000401264 98 ntBASIC0.69□□□□□ -2.3
PDX1P52945 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.69□□□□□ -2.3
PDX1P52945 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.69□□□□□ -2.3
PDX1P52945 Y_RNA.651-201ENST00000459380 103 ntBASIC0.69□□□□□ -2.3
PDX1P52945 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
PDX1P52945 RNU6-182P-201ENST00000516970 105 ntBASIC0.69□□□□□ -2.3
PDX1P52945 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
PDX1P52945 AC141846.1-201ENST00000568348 142 ntBASIC0.69□□□□□ -2.3
PDX1P52945 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
PDX1P52945 Y_RNA.470-201ENST00000384307 117 ntBASIC0.68□□□□□ -2.3
PDX1P52945 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
PDX1P52945 Y_RNA.584-201ENST00000391090 114 ntBASIC0.68□□□□□ -2.3
PDX1P52945 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
PDX1P52945 RNU7-56P-201ENST00000458744 62 ntBASIC0.68□□□□□ -2.3
PDX1P52945 AC112693.2-201ENST00000556538 232 ntBASIC0.68□□□□□ -2.3
PDX1P52945 RNU6-151P-201ENST00000364158 107 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNU6-804P-201ENST00000384286 107 ntBASIC0.67□□□□□ -2.3
PDX1P52945 MIR938-201ENST00000401216 83 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
PDX1P52945 AC096949.1-201ENST00000412047 152 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNU7-197P-201ENST00000458836 62 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNU7-102P-201ENST00000458948 62 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNU2-35P-201ENST00000516446 142 ntBASIC0.67□□□□□ -2.3
PDX1P52945 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.67□□□□□ -2.3
PDX1P52945 RNU6-309P-201ENST00000364573 106 ntBASIC0.66□□□□□ -2.3
PDX1P52945 RNU6-886P-201ENST00000384319 105 ntBASIC0.66□□□□□ -2.3
PDX1P52945 U8.15-201ENST00000390947 134 ntBASIC0.66□□□□□ -2.3
PDX1P52945 RNU6-394P-201ENST00000410735 107 ntBASIC0.66□□□□□ -2.3
PDX1P52945 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
PDX1P52945 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
PDX1P52945 Y_RNA.778-201ENST00000620203 90 ntBASIC0.66□□□□□ -2.3
PDX1P52945 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.65□□□□□ -2.3
PDX1P52945 Y_RNA.8-201ENST00000362353 102 ntBASIC0.65□□□□□ -2.31
PDX1P52945 Y_RNA.398-201ENST00000383952 99 ntBASIC0.65□□□□□ -2.31
PDX1P52945 RNU6-460P-201ENST00000391158 108 ntBASIC0.65□□□□□ -2.31
PDX1P52945 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
PDX1P52945 AL512326.2-201ENST00000426359 151 ntBASIC0.65□□□□□ -2.31
PDX1P52945 RNU7-113P-201ENST00000459273 62 ntBASIC0.65□□□□□ -2.31
PDX1P52945 RNU7-156P-201ENST00000517214 74 ntBASIC0.65□□□□□ -2.31
PDX1P52945 RNU6-794P-201ENST00000517261 64 ntBASIC0.65□□□□□ -2.31
PDX1P52945 SNORD92-201ENST00000585078 85 ntBASIC0.65□□□□□ -2.31
PDX1P52945 AC011603.4-201ENST00000611325 277 ntBASIC0.65□□□□□ -2.31
PDX1P52945 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
PDX1P52945 Y_RNA.120-201ENST00000363304 110 ntBASIC0.64□□□□□ -2.31
PDX1P52945 Y_RNA.270-201ENST00000364693 104 ntBASIC0.64□□□□□ -2.31
PDX1P52945 RNY1P13-201ENST00000365030 105 ntBASIC0.64□□□□□ -2.31
PDX1P52945 RNU6-449P-201ENST00000383914 107 ntBASIC0.64□□□□□ -2.31
PDX1P52945 RNU6-364P-201ENST00000384387 107 ntBASIC0.64□□□□□ -2.31
PDX1P52945 Y_RNA.580-201ENST00000391004 95 ntBASIC0.64□□□□□ -2.31
PDX1P52945 SNORD93-201ENST00000408813 74 ntBASIC0.64□□□□□ -2.31
PDX1P52945 AL022718.1-201ENST00000412004 84 ntBASIC0.64□□□□□ -2.31
PDX1P52945 MTATP6P21-201ENST00000440681 189 ntBASIC0.64□□□□□ -2.31
PDX1P52945 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
PDX1P52945 Y_RNA.690-201ENST00000516603 95 ntBASIC0.64□□□□□ -2.31
PDX1P52945 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
PDX1P52945 MIR4305-201ENST00000583252 102 ntBASIC0.64□□□□□ -2.31
PDX1P52945 MIR8066-201ENST00000617280 78 ntBASIC0.64□□□□□ -2.31
PDX1P52945 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
PDX1P52945 RNU6-949P-201ENST00000384040 107 ntBASIC0.63□□□□□ -2.31
PDX1P52945 SNORA32-201ENST00000384072 121 ntBASIC0.63□□□□□ -2.31
PDX1P52945 MIR193B-201ENST00000384907 83 ntBASIC0.63□□□□□ -2.31
PDX1P52945 Y_RNA.588-201ENST00000391254 102 ntBASIC0.63□□□□□ -2.31
PDX1P52945 RNU4-83P-201ENST00000410863 133 ntBASIC0.63□□□□□ -2.31
PDX1P52945 RPL39P25-201ENST00000449384 154 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms