Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6-675P-201ENST00000384236 104 ntBASIC1.67□□□□□ -2.14
CLK3P49761 Y_RNA.467-201ENST00000384297 102 ntBASIC1.67□□□□□ -2.14
CLK3P49761 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
CLK3P49761 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
CLK3P49761 AL161935.2-201ENST00000414627 60 ntBASIC1.67□□□□□ -2.14
CLK3P49761 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
CLK3P49761 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
CLK3P49761 MIR4764-201ENST00000580680 88 ntBASIC1.67□□□□□ -2.14
CLK3P49761 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
CLK3P49761 AC008133.2-201ENST00000624540 351 ntBASIC1.67□□□□□ -2.14
CLK3P49761 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLK3P49761 Y_RNA.190-201ENST00000363964 101 ntBASIC1.66□□□□□ -2.14
CLK3P49761 SNORD116-22-201ENST00000384430 92 ntBASIC1.66□□□□□ -2.14
CLK3P49761 RNU6-342P-201ENST00000384521 104 ntBASIC1.66□□□□□ -2.14
CLK3P49761 RNU6-813P-201ENST00000384691 107 ntBASIC1.66□□□□□ -2.14
CLK3P49761 MIR206-201ENST00000384872 86 ntBASIC1.66□□□□□ -2.14
CLK3P49761 MIR1261-201ENST00000408659 82 ntBASIC1.66□□□□□ -2.14
CLK3P49761 AC090844.1-201ENST00000422019 156 ntBASIC1.66□□□□□ -2.14
CLK3P49761 AC109327.2-201ENST00000448339 378 ntBASIC1.66□□□□□ -2.14
CLK3P49761 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
CLK3P49761 RNU6-917P-201ENST00000516294 104 ntBASIC1.66□□□□□ -2.14
CLK3P49761 SNORD116-10-201ENST00000363791 102 ntBASIC1.65□□□□□ -2.15
CLK3P49761 SNORD38.1-201ENST00000363863 68 ntBASIC1.65□□□□□ -2.15
CLK3P49761 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
CLK3P49761 RNU6-602P-201ENST00000411155 105 ntBASIC1.65□□□□□ -2.15
CLK3P49761 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
CLK3P49761 AC022137.1-201ENST00000483735 151 ntBASIC1.65□□□□□ -2.15
CLK3P49761 UBL5P1-201ENST00000507979 193 ntBASIC1.65□□□□□ -2.15
CLK3P49761 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
CLK3P49761 RNU6-1006P-201ENST00000516998 103 ntBASIC1.65□□□□□ -2.15
CLK3P49761 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.65□□□□□ -2.15
CLK3P49761 MIR376B-201ENST00000614515 100 ntBASIC1.65□□□□□ -2.15
CLK3P49761 MIR3202-2-201ENST00000635980 79 ntBASIC1.65□□□□□ -2.15
CLK3P49761 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
CLK3P49761 Y_RNA.140-201ENST00000363474 103 ntBASIC1.64□□□□□ -2.15
CLK3P49761 Y_RNA.247-201ENST00000364500 92 ntBASIC1.64□□□□□ -2.15
CLK3P49761 SNORD58A-201ENST00000383875 65 ntBASIC1.64□□□□□ -2.15
CLK3P49761 RNU6-242P-201ENST00000384359 107 ntBASIC1.64□□□□□ -2.15
CLK3P49761 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
CLK3P49761 RNU6-1086P-201ENST00000410930 100 ntBASIC1.64□□□□□ -2.15
CLK3P49761 CYP3A52P-201ENST00000563326 91 ntBASIC1.64□□□□□ -2.15
CLK3P49761 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
CLK3P49761 SNORD114-10-201ENST00000363409 72 ntBASIC1.63□□□□□ -2.15
CLK3P49761 MIR653-201ENST00000385279 96 ntBASIC1.63□□□□□ -2.15
CLK3P49761 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
CLK3P49761 U8.15-201ENST00000390947 134 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-447P-201ENST00000410293 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-1118P-201ENST00000410382 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-1076P-201ENST00000410397 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-355P-201ENST00000410427 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-791P-201ENST00000410467 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-705P-201ENST00000410601 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-402P-201ENST00000410678 103 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-1100P-201ENST00000410691 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-860P-201ENST00000410860 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-1217P-201ENST00000411276 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU6-785P-201ENST00000411324 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
CLK3P49761 RNU7-79P-201ENST00000516082 62 ntBASIC1.63□□□□□ -2.15
CLK3P49761 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.63□□□□□ -2.15
CLK3P49761 U6.90-201ENST00000614007 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 U6.70-201ENST00000620287 104 ntBASIC1.63□□□□□ -2.15
CLK3P49761 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
CLK3P49761 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
CLK3P49761 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
CLK3P49761 RNU6-219P-201ENST00000364728 107 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RNU6-1276P-201ENST00000365372 104 ntBASIC1.62□□□□□ -2.15
CLK3P49761 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RNU6-1307P-201ENST00000391012 103 ntBASIC1.62□□□□□ -2.15
CLK3P49761 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RPS29P28-201ENST00000446439 141 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RNU6-322P-201ENST00000516010 103 ntBASIC1.62□□□□□ -2.15
CLK3P49761 SNORD67.1-201ENST00000516618 108 ntBASIC1.62□□□□□ -2.15
CLK3P49761 MIR548AO-201ENST00000579992 96 ntBASIC1.62□□□□□ -2.15
CLK3P49761 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
CLK3P49761 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
CLK3P49761 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.62□□□□□ -2.15
CLK3P49761 MIR4251-201ENST00000635819 61 ntBASIC1.62□□□□□ -2.15
CLK3P49761 RNU6-228P-201ENST00000362700 106 ntBASIC1.61□□□□□ -2.15
CLK3P49761 Y_RNA.73-201ENST00000362910 113 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU6-1163P-201ENST00000364516 107 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU6-865P-201ENST00000364772 107 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU6-1124P-201ENST00000384169 107 ntBASIC1.61□□□□□ -2.15
CLK3P49761 MIR34C-201ENST00000384831 77 ntBASIC1.61□□□□□ -2.15
CLK3P49761 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
CLK3P49761 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU7-137P-201ENST00000516788 62 ntBASIC1.61□□□□□ -2.15
CLK3P49761 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
CLK3P49761 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
CLK3P49761 MIR4668-201ENST00000582284 70 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU6-86P-201ENST00000606534 107 ntBASIC1.61□□□□□ -2.15
CLK3P49761 RNU6-497P-201ENST00000365316 104 ntBASIC1.6□□□□□ -2.15
CLK3P49761 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
CLK3P49761 RNU6-979P-201ENST00000383896 107 ntBASIC1.6□□□□□ -2.15
CLK3P49761 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
CLK3P49761 SNORD38B-201ENST00000384690 67 ntBASIC1.6□□□□□ -2.15
CLK3P49761 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
CLK3P49761 Y_RNA.620-201ENST00000411009 88 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 257.1 ms