Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
THBS3P49746 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
THBS3P49746 AC062037.1-201ENST00000605302 128 ntBASIC1.39□□□□□ -2.19
THBS3P49746 MIR4251-201ENST00000635819 61 ntBASIC1.39□□□□□ -2.19
THBS3P49746 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
THBS3P49746 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
THBS3P49746 Y_RNA.377-201ENST00000365644 108 ntBASIC1.38□□□□□ -2.19
THBS3P49746 MIR206-201ENST00000384872 86 ntBASIC1.38□□□□□ -2.19
THBS3P49746 SNORD41-201ENST00000386967 70 ntBASIC1.38□□□□□ -2.19
THBS3P49746 JTBP1-201ENST00000441314 247 ntBASIC1.38□□□□□ -2.19
THBS3P49746 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
THBS3P49746 Y_RNA.659-201ENST00000515994 113 ntBASIC1.38□□□□□ -2.19
THBS3P49746 RNU6-162P-201ENST00000516228 103 ntBASIC1.38□□□□□ -2.19
THBS3P49746 RNU6-250P-201ENST00000516958 103 ntBASIC1.38□□□□□ -2.19
THBS3P49746 MIR4777-201ENST00000583710 86 ntBASIC1.38□□□□□ -2.19
THBS3P49746 AL512310.12-203ENST00000640543 90 ntBASIC1.38□□□□□ -2.19
THBS3P49746 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
THBS3P49746 RNU6-1313P-201ENST00000362622 102 ntBASIC1.37□□□□□ -2.19
THBS3P49746 Y_RNA.247-201ENST00000364500 92 ntBASIC1.37□□□□□ -2.19
THBS3P49746 SNORD115-35-201ENST00000365122 82 ntBASIC1.37□□□□□ -2.19
THBS3P49746 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
THBS3P49746 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
THBS3P49746 AC096949.1-201ENST00000412047 152 ntBASIC1.37□□□□□ -2.19
THBS3P49746 UBL5P1-201ENST00000507979 193 ntBASIC1.37□□□□□ -2.19
THBS3P49746 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
THBS3P49746 RNU7-2P-201ENST00000516096 62 ntBASIC1.37□□□□□ -2.19
THBS3P49746 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
THBS3P49746 SNORD67.1-201ENST00000516618 108 ntBASIC1.37□□□□□ -2.19
THBS3P49746 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
THBS3P49746 AC026421.1-201ENST00000519101 163 ntBASIC1.37□□□□□ -2.19
THBS3P49746 U7.3-201ENST00000616123 62 ntBASIC1.37□□□□□ -2.19
THBS3P49746 Y_RNA.164-201ENST00000363709 102 ntBASIC1.36□□□□□ -2.19
THBS3P49746 SNORD45B-201ENST00000364617 72 ntBASIC1.36□□□□□ -2.19
THBS3P49746 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
THBS3P49746 RNU6-1134P-201ENST00000365156 101 ntBASIC1.36□□□□□ -2.19
THBS3P49746 Y_RNA.338-201ENST00000365320 114 ntBASIC1.36□□□□□ -2.19
THBS3P49746 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
THBS3P49746 Y_RNA.467-201ENST00000384297 102 ntBASIC1.36□□□□□ -2.19
THBS3P49746 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
THBS3P49746 RNU6-1086P-201ENST00000410930 100 ntBASIC1.36□□□□□ -2.19
THBS3P49746 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
THBS3P49746 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
THBS3P49746 AC108729.3-201ENST00000513484 108 ntBASIC1.36□□□□□ -2.19
THBS3P49746 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
THBS3P49746 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.36□□□□□ -2.19
THBS3P49746 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
THBS3P49746 MIR8081-201ENST00000611533 95 ntBASIC1.36□□□□□ -2.19
THBS3P49746 MIR376B-201ENST00000614515 100 ntBASIC1.36□□□□□ -2.19
THBS3P49746 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
THBS3P49746 Y_RNA.95-201ENST00000363079 95 ntBASIC1.35□□□□□ -2.19
THBS3P49746 RNA5SP212-201ENST00000391223 107 ntBASIC1.35□□□□□ -2.19
THBS3P49746 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
THBS3P49746 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
THBS3P49746 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
THBS3P49746 RNU6-1006P-201ENST00000516998 103 ntBASIC1.35□□□□□ -2.19
THBS3P49746 AC022254.1-201ENST00000567857 235 ntBASIC1.35□□□□□ -2.19
THBS3P49746 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
THBS3P49746 MIR3192-201ENST00000584920 77 ntBASIC1.35□□□□□ -2.19
THBS3P49746 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.35□□□□□ -2.19
THBS3P49746 AL096861.1-201ENST00000610899 123 ntBASIC1.35□□□□□ -2.19
THBS3P49746 AC105081.1-201ENST00000617727 106 ntBASIC1.35□□□□□ -2.19
THBS3P49746 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
THBS3P49746 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
THBS3P49746 MIR494-201ENST00000349529 81 ntBASIC1.34□□□□□ -2.19
THBS3P49746 Y_RNA.448-201ENST00000384185 108 ntBASIC1.34□□□□□ -2.19
THBS3P49746 MIR34C-201ENST00000384831 77 ntBASIC1.34□□□□□ -2.19
THBS3P49746 Y_RNA.593-201ENST00000410292 98 ntBASIC1.34□□□□□ -2.19
THBS3P49746 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
THBS3P49746 RNU7-137P-201ENST00000516788 62 ntBASIC1.34□□□□□ -2.19
THBS3P49746 SNORA77B-201ENST00000578179 125 ntBASIC1.34□□□□□ -2.19
THBS3P49746 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.34□□□□□ -2.19
THBS3P49746 MIR4255-201ENST00000579351 72 ntBASIC1.34□□□□□ -2.19
THBS3P49746 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.34□□□□□ -2.19
THBS3P49746 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
THBS3P49746 RNY1P10-201ENST00000363268 113 ntBASIC1.33□□□□□ -2.2
THBS3P49746 RNA5SP173-201ENST00000364857 136 ntBASIC1.33□□□□□ -2.2
THBS3P49746 SNORD38B-201ENST00000384690 67 ntBASIC1.33□□□□□ -2.2
THBS3P49746 RNU6-1321P-201ENST00000390905 107 ntBASIC1.33□□□□□ -2.2
THBS3P49746 RNU6-592P-201ENST00000411333 103 ntBASIC1.33□□□□□ -2.2
THBS3P49746 AC109327.2-201ENST00000448339 378 ntBASIC1.33□□□□□ -2.2
THBS3P49746 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.33□□□□□ -2.2
THBS3P49746 RN7SKP12-201ENST00000516275 143 ntBASIC1.33□□□□□ -2.2
THBS3P49746 AC015688.6-201ENST00000577737 104 ntBASIC1.33□□□□□ -2.2
THBS3P49746 AC096720.1-201ENST00000604441 183 ntBASIC1.33□□□□□ -2.2
THBS3P49746 SNORD38B-202ENST00000625943 69 ntBASIC1.33□□□□□ -2.2
THBS3P49746 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
THBS3P49746 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
THBS3P49746 Y_RNA.17-201ENST00000362433 111 ntBASIC1.32□□□□□ -2.2
THBS3P49746 SNORA25.3-201ENST00000363205 127 ntBASIC1.32□□□□□ -2.2
THBS3P49746 Y_RNA.190-201ENST00000363964 101 ntBASIC1.32□□□□□ -2.2
THBS3P49746 RNA5SP48-201ENST00000363969 126 ntBASIC1.32□□□□□ -2.2
THBS3P49746 RNY1P13-201ENST00000365030 105 ntBASIC1.32□□□□□ -2.2
THBS3P49746 MIR450A2-201ENST00000385022 100 ntBASIC1.32□□□□□ -2.2
THBS3P49746 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
THBS3P49746 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
THBS3P49746 SNORA17.3-201ENST00000391159 129 ntBASIC1.32□□□□□ -2.2
THBS3P49746 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
THBS3P49746 AC244023.1-201ENST00000426884 112 ntBASIC1.32□□□□□ -2.2
THBS3P49746 snoU13.25-201ENST00000458945 104 ntBASIC1.32□□□□□ -2.2
THBS3P49746 Y_RNA.705-201ENST00000516862 110 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms