Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
RFX2P48378 RNU6-1165P-201ENST00000410119 107 ntBASIC1.14□□□□□ -2.23
RFX2P48378 RPL39P25-201ENST00000449384 154 ntBASIC1.14□□□□□ -2.23
RFX2P48378 SNORD67.1-201ENST00000516618 108 ntBASIC1.14□□□□□ -2.23
RFX2P48378 FAM71BP1-201ENST00000604431 523 ntBASIC1.14□□□□□ -2.23
RFX2P48378 uc_338.28-201ENST00000612082 187 ntBASIC1.14□□□□□ -2.23
RFX2P48378 AL162726.3-218ENST00000636401 95 ntBASIC1.14□□□□□ -2.23
RFX2P48378 U8.6-201ENST00000364939 135 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.13□□□□□ -2.23
RFX2P48378 snoU13.21-201ENST00000459368 105 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RPL39P34-201ENST00000477141 156 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RN7SL429P-201ENST00000479090 223 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RN7SL489P-201ENST00000486185 223 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RN7SL327P-201ENST00000488659 223 ntBASIC1.13□□□□□ -2.23
RFX2P48378 PDCD5P2-201ENST00000507570 312 ntBASIC1.13□□□□□ -2.23
RFX2P48378 AC068339.1-201ENST00000526965 141 ntBASIC1.13□□□□□ -2.23
RFX2P48378 AC023827.1-201ENST00000569247 97 ntBASIC1.13□□□□□ -2.23
RFX2P48378 RN7SL853P-201ENST00000617250 223 ntBASIC1.13□□□□□ -2.23
RFX2P48378 AC105081.1-201ENST00000617727 106 ntBASIC1.13□□□□□ -2.23
RFX2P48378 MIR377-201ENST00000362145 69 ntBASIC1.12□□□□□ -2.23
RFX2P48378 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
RFX2P48378 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
RFX2P48378 Y_RNA.49-201ENST00000362714 112 ntBASIC1.12□□□□□ -2.23
RFX2P48378 Y_RNA.116-201ENST00000363292 103 ntBASIC1.12□□□□□ -2.23
RFX2P48378 RNU4-67P-201ENST00000364569 141 ntBASIC1.12□□□□□ -2.23
RFX2P48378 Y_RNA.309-201ENST00000365046 111 ntBASIC1.12□□□□□ -2.23
RFX2P48378 MIR563-201ENST00000385080 79 ntBASIC1.12□□□□□ -2.23
RFX2P48378 SNORA7.5-201ENST00000410672 110 ntBASIC1.12□□□□□ -2.23
RFX2P48378 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
RFX2P48378 MIR30D-201ENST00000362283 70 ntBASIC1.11□□□□□ -2.23
RFX2P48378 Y_RNA.155-201ENST00000363632 101 ntBASIC1.11□□□□□ -2.23
RFX2P48378 Y_RNA.168-201ENST00000363740 102 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU6-1014P-201ENST00000383940 103 ntBASIC1.11□□□□□ -2.23
RFX2P48378 Y_RNA.507-201ENST00000384500 99 ntBASIC1.11□□□□□ -2.23
RFX2P48378 MIR206-201ENST00000384872 86 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU6-1307P-201ENST00000391012 103 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU7-21P-201ENST00000459430 62 ntBASIC1.11□□□□□ -2.23
RFX2P48378 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU6-521P-201ENST00000516663 105 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU7-137P-201ENST00000516788 62 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU6-548P-201ENST00000517083 115 ntBASIC1.11□□□□□ -2.23
RFX2P48378 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
RFX2P48378 AC036111.3-201ENST00000526389 112 ntBASIC1.11□□□□□ -2.23
RFX2P48378 MIR5009-201ENST00000578736 100 ntBASIC1.11□□□□□ -2.23
RFX2P48378 AL645939.4-201ENST00000604495 135 ntBASIC1.11□□□□□ -2.23
RFX2P48378 RNU6-363P-201ENST00000362895 105 ntBASIC1.1□□□□□ -2.23
RFX2P48378 SNORD113.3-201ENST00000364630 78 ntBASIC1.1□□□□□ -2.23
RFX2P48378 RNU6-580P-201ENST00000365159 107 ntBASIC1.1□□□□□ -2.23
RFX2P48378 RNA5SP190-201ENST00000365222 118 ntBASIC1.1□□□□□ -2.23
RFX2P48378 RNU6-949P-201ENST00000384040 107 ntBASIC1.1□□□□□ -2.23
RFX2P48378 SNORD26-201ENST00000384147 75 ntBASIC1.1□□□□□ -2.23
RFX2P48378 RNU6-106P-201ENST00000384405 107 ntBASIC1.1□□□□□ -2.23
RFX2P48378 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
RFX2P48378 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
RFX2P48378 MIR605-201ENST00000385078 83 ntBASIC1.1□□□□□ -2.23
RFX2P48378 MIR1261-201ENST00000408659 82 ntBASIC1.1□□□□□ -2.23
RFX2P48378 RNU6-554P-201ENST00000410466 106 ntBASIC1.1□□□□□ -2.23
RFX2P48378 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
RFX2P48378 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
RFX2P48378 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.1□□□□□ -2.23
RFX2P48378 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
RFX2P48378 Y_RNA.163-201ENST00000363702 113 ntBASIC1.09□□□□□ -2.23
RFX2P48378 RNU6-755P-201ENST00000364400 103 ntBASIC1.09□□□□□ -2.23
RFX2P48378 SNORD115-35-201ENST00000365122 82 ntBASIC1.09□□□□□ -2.23
RFX2P48378 Y_RNA.323-201ENST00000365157 109 ntBASIC1.09□□□□□ -2.23
RFX2P48378 RNU6-409P-201ENST00000384114 104 ntBASIC1.09□□□□□ -2.23
RFX2P48378 Y_RNA.448-201ENST00000384185 108 ntBASIC1.09□□□□□ -2.23
RFX2P48378 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
RFX2P48378 MIR1912-201ENST00000410389 80 ntBASIC1.09□□□□□ -2.23
RFX2P48378 SNORD83.1-201ENST00000411362 77 ntBASIC1.09□□□□□ -2.23
RFX2P48378 AC015818.7-201ENST00000428754 109 ntBASIC1.09□□□□□ -2.23
RFX2P48378 AL353813.1-201ENST00000440700 253 ntBASIC1.09□□□□□ -2.23
RFX2P48378 AC087499.7-201ENST00000441958 109 ntBASIC1.09□□□□□ -2.23
RFX2P48378 RNU7-2P-201ENST00000516096 62 ntBASIC1.09□□□□□ -2.23
RFX2P48378 SNORA4-201ENST00000584302 138 ntBASIC1.09□□□□□ -2.23
RFX2P48378 RNU6-94P-201ENST00000607728 107 ntBASIC1.09□□□□□ -2.23
RFX2P48378 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
RFX2P48378 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
RFX2P48378 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RFX2P48378 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RFX2P48378 MIR450A1-201ENST00000362262 91 ntBASIC1.08□□□□□ -2.24
RFX2P48378 SNORD114-10-201ENST00000363409 72 ntBASIC1.08□□□□□ -2.24
RFX2P48378 RNU6-1321P-201ENST00000390905 107 ntBASIC1.08□□□□□ -2.24
RFX2P48378 U8.15-201ENST00000390947 134 ntBASIC1.08□□□□□ -2.24
RFX2P48378 RNU6-679P-201ENST00000391003 106 ntBASIC1.08□□□□□ -2.24
RFX2P48378 RNU6-733P-201ENST00000410759 104 ntBASIC1.08□□□□□ -2.24
RFX2P48378 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
RFX2P48378 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RFX2P48378 RNU6-153P-201ENST00000364422 104 ntBASIC1.07□□□□□ -2.24
RFX2P48378 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
RFX2P48378 MT-TF-201ENST00000387314 71 ntBASIC1.07□□□□□ -2.24
RFX2P48378 MIR1302-5-201ENST00000408164 150 ntBASIC1.07□□□□□ -2.24
RFX2P48378 RNU1-123P-201ENST00000458950 160 ntBASIC1.07□□□□□ -2.24
RFX2P48378 SNORD13-201ENST00000459299 104 ntBASIC1.07□□□□□ -2.24
RFX2P48378 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
RFX2P48378 Y_RNA.360-201ENST00000365512 102 ntBASIC1.06□□□□□ -2.24
RFX2P48378 SNORA67.5-201ENST00000391036 107 ntBASIC1.06□□□□□ -2.24
RFX2P48378 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.06□□□□□ -2.24
RFX2P48378 SNORD111-201ENST00000408139 94 ntBASIC1.06□□□□□ -2.24
RFX2P48378 MIR1289-2-201ENST00000408360 111 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms