Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR4636-201ENST00000582271 80 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU6-797P-201ENST00000363101 109 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 SNORA18-201ENST00000384416 132 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 MIR1265-201ENST00000408444 86 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 AC069271.1-201ENST00000445577 156 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 RNU7-70P-201ENST00000516941 66 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
CXCL12P48061 RNU6-978P-201ENST00000364371 103 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU4-16P-201ENST00000364737 141 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU6-949P-201ENST00000384040 107 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 Y_RNA.461-201ENST00000384263 103 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU6-291P-201ENST00000384720 107 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR1302-6-201ENST00000408466 90 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU4-43P-201ENST00000410628 137 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 AL121914.1-201ENST00000450188 156 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 SNORA25.16-201ENST00000516741 121 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU6-1258P-201ENST00000516911 111 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MTND5P34-201ENST00000568888 325 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR5589-201ENST00000579442 60 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR8062-201ENST00000621515 85 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
CXCL12P48061 Y_RNA.174-201ENST00000363781 105 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 Y_RNA.262-201ENST00000364641 102 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 RNY1P13-201ENST00000365030 105 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 Y_RNA.536-201ENST00000384621 113 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 Y_RNA.539-201ENST00000384635 107 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 RNY3P16-201ENST00000516338 101 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 SNORD116-25-201ENST00000516517 92 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 SCARNA15-202ENST00000516881 127 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 AC044792.1-201ENST00000593294 196 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 AC011921.3-201ENST00000605540 361 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
CXCL12P48061 MTND5P32-201ENST00000560711 1802 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 Y_RNA.54-201ENST00000362766 105 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 Y_RNA.76-201ENST00000362931 109 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNU6-103P-201ENST00000363686 107 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 Y_RNA.277-201ENST00000364754 102 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNU6-535P-201ENST00000384722 107 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNA5SP227-201ENST00000516184 113 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 Y_RNA.697-201ENST00000516776 113 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNU6-1149P-201ENST00000516810 97 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 RNA5SP47-201ENST00000517230 109 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 MIR378D2-201ENST00000580636 98 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 MIR4744-201ENST00000581563 82 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 MIR6755-201ENST00000619993 66 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
CXCL12P48061 Y_RNA.170-201ENST00000363746 110 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 RNU6-1229P-201ENST00000364295 107 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 RNU6-1227P-201ENST00000383981 107 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 RNU6-472P-201ENST00000384299 107 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 Y_RNA.757-201ENST00000578934 114 ntBASIC0.03□□□□□ -2.4
CXCL12P48061 Y_RNA.60-201ENST00000362831 98 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.171-201ENST00000363760 102 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.292-201ENST00000364904 97 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.518-201ENST00000384552 113 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 RNU6-578P-201ENST00000390980 103 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.604-201ENST00000410574 102 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 RNU5E-9P-201ENST00000411164 104 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.720-201ENST00000517166 92 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 MIR4802-201ENST00000581881 80 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 U6.104-201ENST00000637979 90 ntBASIC0.02□□□□□ -2.41
CXCL12P48061 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 Y_RNA.308-201ENST00000365043 101 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 Y_RNA.352-201ENST00000365439 102 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 Y_RNA.396-201ENST00000383949 103 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 Y_RNA.574-201ENST00000384766 95 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 MIR624-201ENST00000385217 97 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 RNU6-1086P-201ENST00000410930 100 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 RNU7-79P-201ENST00000516082 62 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 RNU2-4P-201ENST00000606190 192 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 AC244669.1-204ENST00000621564 178 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
CXCL12P48061 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
CXCL12P48061 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
CXCL12P48061 RNA5SP245-201ENST00000364239 121 ntBASIC0□□□□□ -2.41
CXCL12P48061 Y_RNA.470-201ENST00000384307 117 ntBASIC0□□□□□ -2.41
CXCL12P48061 RNU6-493P-201ENST00000391321 108 ntBASIC0□□□□□ -2.41
CXCL12P48061 RNU6-531P-201ENST00000516694 104 ntBASIC0□□□□□ -2.41
CXCL12P48061 DEFB131E-201ENST00000532329 154 ntBASIC0□□□□□ -2.41
CXCL12P48061 MIR4639-201ENST00000584938 69 ntBASIC0□□□□□ -2.41
CXCL12P48061 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
CXCL12P48061 RNU6-923P-201ENST00000364753 107 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 MIR548F4-201ENST00000408515 105 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 RNU6-893P-201ENST00000458841 100 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms