Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
RFC3P40938 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 AL606845.1-201ENST00000404881 255 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 AC108059.2-201ENST00000434626 151 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 RNU7-79P-201ENST00000516082 62 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 AC138749.4-201ENST00000563970 127 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 MIR378D2-201ENST00000580636 98 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 MIR3925-201ENST00000584674 77 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 MTND5P32-201ENST00000560711 1802 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 RNA5SP133-201ENST00000363368 119 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 RNU6-702P-201ENST00000364982 107 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 MIR616-201ENST00000385293 97 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 RNU7-35P-201ENST00000517174 62 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 RNU7-161P-201ENST00000517289 62 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 MIR4677-201ENST00000584153 80 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 AC011921.3-201ENST00000605540 361 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 MIR3666-201ENST00000607845 111 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 uc_338.28-201ENST00000612082 187 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 AC090971.5-201ENST00000621102 293 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 uc_338.36-201ENST00000622331 158 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 MIR6514-201ENST00000622549 70 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 AC139792.2-201ENST00000624218 587 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 AC073869.9-201ENST00000641610 120 ntBASIC-0.49□□□□□ -2.49
RFC3P40938 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.5□□□□□ -2.49
RFC3P40938 RNU6-450P-201ENST00000364654 107 ntBASIC-0.5□□□□□ -2.49
RFC3P40938 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.5□□□□□ -2.49
RFC3P40938 SNORA75.1-201ENST00000391130 148 ntBASIC-0.5□□□□□ -2.49
RFC3P40938 SNORA40.15-201ENST00000516884 107 ntBASIC-0.5□□□□□ -2.49
RFC3P40938 RNA5SP98-201ENST00000363158 137 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 RPS29P8-201ENST00000445109 171 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 RNU6-453P-201ENST00000516819 85 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 CR383656.4-201ENST00000546909 122 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.51□□□□□ -2.49
RFC3P40938 FTX_2.1-201ENST00000618816 94 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 U6.109-201ENST00000636749 87 ntBASIC-0.51□□□□□ -2.49
RFC3P40938 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNU6-770P-201ENST00000363929 105 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNY3P1-201ENST00000365085 102 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNU4-70P-201ENST00000384579 139 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNA5SP300-201ENST00000391197 107 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNU6-101P-201ENST00000410323 104 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.52□□□□□ -2.49
RFC3P40938 RNU7-104P-201ENST00000459398 79 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 SERF1AP1-201ENST00000514575 187 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNU6-875P-201ENST00000516488 106 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.52□□□□□ -2.49
RFC3P40938 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.53□□□□□ -2.49
RFC3P40938 MIR604-201ENST00000384880 94 ntBASIC-0.53□□□□□ -2.49
RFC3P40938 SNORD41.1-201ENST00000391000 69 ntBASIC-0.53□□□□□ -2.49
RFC3P40938 RNU6-758P-201ENST00000516292 89 ntBASIC-0.53□□□□□ -2.49
RFC3P40938 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.53□□□□□ -2.49
RFC3P40938 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 RNA5SP403-201ENST00000363598 108 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 SNORA79-201ENST00000408376 140 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 RPL21P38-201ENST00000418090 167 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 ELOCP20-201ENST00000422460 345 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 HAR1A.1-201ENST00000459583 118 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 RN7SL660P-201ENST00000614852 299 ntBASIC-0.54□□□□□ -2.5
RFC3P40938 MIR148A-201ENST00000362215 68 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 RNU4-16P-201ENST00000364737 141 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 RNA5SP451-201ENST00000410588 110 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 SCARNA15-202ENST00000516881 127 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 RNU6-570P-201ENST00000517051 105 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 MIR548H5-201ENST00000580314 60 ntBASIC-0.55□□□□□ -2.5
RFC3P40938 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 RNU4-43P-201ENST00000410628 137 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 AC109327.2-201ENST00000448339 378 ntBASIC-0.56□□□□□ -2.5
RFC3P40938 AC108676.2-201ENST00000605225 163 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms