Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR194-1-201ENST00000384892 85 ntBASIC2.47□□□□□ -2.01
GPC1P35052 MIR516A1-201ENST00000385033 90 ntBASIC2.47□□□□□ -2.01
GPC1P35052 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.47□□□□□ -2.01
GPC1P35052 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
GPC1P35052 RNU6-205P-201ENST00000390858 107 ntBASIC2.47□□□□□ -2.01
GPC1P35052 RNU6-557P-201ENST00000516842 110 ntBASIC2.47□□□□□ -2.01
GPC1P35052 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
GPC1P35052 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
GPC1P35052 Y_RNA.500-201ENST00000384466 111 ntBASIC2.46□□□□□ -2.02
GPC1P35052 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
GPC1P35052 AC005908.1-201ENST00000468701 347 ntBASIC2.46□□□□□ -2.02
GPC1P35052 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
GPC1P35052 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
GPC1P35052 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
GPC1P35052 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GPC1P35052 AC008163.1-202ENST00000636004 2889 ntBASIC2.45□□□□□ -2.02
GPC1P35052 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
GPC1P35052 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GPC1P35052 SNORD41-201ENST00000386967 70 ntBASIC2.45□□□□□ -2.02
GPC1P35052 RNU6-243P-201ENST00000391140 107 ntBASIC2.45□□□□□ -2.02
GPC1P35052 RNU6-1165P-201ENST00000410119 107 ntBASIC2.45□□□□□ -2.02
GPC1P35052 HSPE1P24-201ENST00000450782 238 ntBASIC2.45□□□□□ -2.02
GPC1P35052 RNU6-523P-201ENST00000516304 54 ntBASIC2.45□□□□□ -2.02
GPC1P35052 SNORA18.5-201ENST00000516616 101 ntBASIC2.45□□□□□ -2.02
GPC1P35052 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.45□□□□□ -2.02
GPC1P35052 MIR4529-201ENST00000578110 78 ntBASIC2.45□□□□□ -2.02
GPC1P35052 MIR4484-201ENST00000582855 83 ntBASIC2.45□□□□□ -2.02
GPC1P35052 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
GPC1P35052 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GPC1P35052 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GPC1P35052 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GPC1P35052 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
GPC1P35052 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
GPC1P35052 MIR563-201ENST00000385080 79 ntBASIC2.44□□□□□ -2.02
GPC1P35052 RNU6-1254P-201ENST00000391266 104 ntBASIC2.44□□□□□ -2.02
GPC1P35052 RNU7-62P-201ENST00000458856 62 ntBASIC2.44□□□□□ -2.02
GPC1P35052 RNU6-947P-201ENST00000516264 106 ntBASIC2.44□□□□□ -2.02
GPC1P35052 SNORA31.25-201ENST00000517242 134 ntBASIC2.44□□□□□ -2.02
GPC1P35052 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.44□□□□□ -2.02
GPC1P35052 AC245884.12-201ENST00000615364 59 ntBASIC2.44□□□□□ -2.02
GPC1P35052 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
GPC1P35052 MIR30D-201ENST00000362283 70 ntBASIC2.43□□□□□ -2.02
GPC1P35052 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
GPC1P35052 MIR1302-7-201ENST00000408841 72 ntBASIC2.43□□□□□ -2.02
GPC1P35052 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
GPC1P35052 SNORD109B-201ENST00000458961 67 ntBASIC2.43□□□□□ -2.02
GPC1P35052 SNORD109A-201ENST00000459128 67 ntBASIC2.43□□□□□ -2.02
GPC1P35052 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
GPC1P35052 GTF3AP2-201ENST00000557014 266 ntBASIC2.43□□□□□ -2.02
GPC1P35052 MIR4672-201ENST00000583126 81 ntBASIC2.43□□□□□ -2.02
GPC1P35052 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
GPC1P35052 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
GPC1P35052 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
GPC1P35052 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
GPC1P35052 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
GPC1P35052 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
GPC1P35052 SNORD36A-201ENST00000362874 73 ntBASIC2.42□□□□□ -2.02
GPC1P35052 RNU6-132P-201ENST00000383863 107 ntBASIC2.42□□□□□ -2.02
GPC1P35052 RNU6-411P-201ENST00000384451 107 ntBASIC2.42□□□□□ -2.02
GPC1P35052 MIR635-201ENST00000384830 98 ntBASIC2.42□□□□□ -2.02
GPC1P35052 FGF7P7-201ENST00000514120 227 ntBASIC2.42□□□□□ -2.02
GPC1P35052 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
GPC1P35052 MIR4264-201ENST00000583520 66 ntBASIC2.42□□□□□ -2.02
GPC1P35052 AC104996.3-201ENST00000590718 94 ntBASIC2.42□□□□□ -2.02
GPC1P35052 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
GPC1P35052 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
GPC1P35052 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
GPC1P35052 RNU6-466P-201ENST00000391224 103 ntBASIC2.41□□□□□ -2.02
GPC1P35052 AC245517.4-201ENST00000448601 281 ntBASIC2.41□□□□□ -2.02
GPC1P35052 RNA5SP356-201ENST00000515972 94 ntBASIC2.41□□□□□ -2.02
GPC1P35052 Y_RNA.660-201ENST00000516002 120 ntBASIC2.41□□□□□ -2.02
GPC1P35052 AL357312.1-201ENST00000603879 298 ntBASIC2.41□□□□□ -2.02
GPC1P35052 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
GPC1P35052 Y_RNA.283-201ENST00000364798 112 ntBASIC2.4□□□□□ -2.03
GPC1P35052 RNU6-590P-201ENST00000365039 107 ntBASIC2.4□□□□□ -2.03
GPC1P35052 RNU6-439P-201ENST00000384188 106 ntBASIC2.4□□□□□ -2.03
GPC1P35052 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
GPC1P35052 RNU6-531P-201ENST00000516694 104 ntBASIC2.4□□□□□ -2.03
GPC1P35052 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
GPC1P35052 MIR4513-201ENST00000581077 86 ntBASIC2.4□□□□□ -2.03
GPC1P35052 MIR3064-201ENST00000581130 66 ntBASIC2.4□□□□□ -2.03
GPC1P35052 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
GPC1P35052 MIRLET7F1-201ENST00000362202 87 ntBASIC2.39□□□□□ -2.03
GPC1P35052 RNA5SP276-201ENST00000362580 94 ntBASIC2.39□□□□□ -2.03
GPC1P35052 Y_RNA.491-201ENST00000384417 107 ntBASIC2.39□□□□□ -2.03
GPC1P35052 MIR548U-201ENST00000390728 81 ntBASIC2.39□□□□□ -2.03
GPC1P35052 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
GPC1P35052 MIR2115-201ENST00000516657 100 ntBASIC2.39□□□□□ -2.03
GPC1P35052 MIR4298-201ENST00000584380 73 ntBASIC2.39□□□□□ -2.03
GPC1P35052 uc_338.6-201ENST00000613544 171 ntBASIC2.39□□□□□ -2.03
GPC1P35052 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
GPC1P35052 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
GPC1P35052 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
GPC1P35052 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
GPC1P35052 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
GPC1P35052 RNU6-53P-201ENST00000365367 106 ntBASIC2.38□□□□□ -2.03
GPC1P35052 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
GPC1P35052 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
GPC1P35052 SNORD77.2-201ENST00000391045 68 ntBASIC2.38□□□□□ -2.03
GPC1P35052 AC015818.7-201ENST00000428754 109 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms