Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR616-201ENST00000385293 97 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 MIR548L-201ENST00000408303 86 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 RNU6-101P-201ENST00000410323 104 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 AC244505.6-201ENST00000452829 130 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 RNU7-79P-201ENST00000516082 62 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 RNU6-561P-201ENST00000516222 102 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 RNU7-161P-201ENST00000517289 62 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 MIR5706-201ENST00000579841 80 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.35□□□□□ -2.47
SLC6A1P30531 U6.109-201ENST00000636749 87 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 RNU6-770P-201ENST00000363929 105 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 SERF1AP1-201ENST00000514575 187 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 RNU6-180P-201ENST00000516697 61 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 MIR4677-201ENST00000584153 80 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 MIR3925-201ENST00000584674 77 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.36□□□□□ -2.47
SLC6A1P30531 MIR101-2-201ENST00000362195 79 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 SNORD42.2-201ENST00000365570 69 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 SNORA22B-201ENST00000383876 138 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 Z95118.1-201ENST00000421372 247 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 RNY3P15-201ENST00000516297 97 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 SCARNA15-202ENST00000516881 127 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 RNU7-70P-201ENST00000516941 66 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 RNU7-35P-201ENST00000517174 62 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 MIR4795-201ENST00000584182 89 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 AL360085.1-201ENST00000604713 532 ntBASIC-0.37□□□□□ -2.47
SLC6A1P30531 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 RNU6-35P-201ENST00000384530 107 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 MTND5P22-201ENST00000458380 195 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 RNU7-104P-201ENST00000459398 79 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 AC082651.2-201ENST00000496833 166 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 MTND3P22-201ENST00000510932 243 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 AC138749.4-201ENST00000563970 127 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 uc_338.28-201ENST00000612082 187 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.38□□□□□ -2.47
SLC6A1P30531 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 SNORD2.1-201ENST00000458762 69 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 RNU2-60P-201ENST00000517290 128 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 MIR378D2-201ENST00000580636 98 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 AL670379.3-201ENST00000605040 251 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
SLC6A1P30531 RNA5SP403-201ENST00000363598 108 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 RNU6-381P-201ENST00000391259 108 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 RNU6-651P-201ENST00000411040 105 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.4□□□□□ -2.47
SLC6A1P30531 RNU6-893P-201ENST00000458841 100 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.4□□□□□ -2.47
SLC6A1P30531 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 RNU6-46P-201ENST00000383860 107 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 SNORD41.1-201ENST00000391000 69 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 SNORA75.1-201ENST00000391130 148 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 SNORA79-201ENST00000408376 140 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 AC073869.9-201ENST00000641610 120 ntBASIC-0.41□□□□□ -2.48
SLC6A1P30531 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNU6-978P-201ENST00000364371 103 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNY1P2-201ENST00000364820 117 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNU6-728P-201ENST00000365375 104 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNU4-70P-201ENST00000384579 139 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNU4-43P-201ENST00000410628 137 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNA5SP144-201ENST00000410846 116 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 RNU7-137P-201ENST00000516788 62 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 MIR4636-201ENST00000582271 80 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 AP001180.6-201ENST00000584918 159 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 AC098479.1-201ENST00000609225 154 ntBASIC-0.42□□□□□ -2.48
SLC6A1P30531 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 SNORA32-201ENST00000384072 121 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 MIR106A-201ENST00000384870 81 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 MTND5P20-201ENST00000448677 143 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 CR383656.4-201ENST00000546909 122 ntBASIC-0.43□□□□□ -2.48
SLC6A1P30531 AL359881.1-201ENST00000602916 267 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms