Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC113410.1-201ENST00000505029 247 ntBASIC1.32□□□□□ -2.2
CNGA1P29973 RNU2-35P-201ENST00000516446 142 ntBASIC1.32□□□□□ -2.2
CNGA1P29973 SNORD115-2-201ENST00000362842 82 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 SNORD115-20-201ENST00000365099 82 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 Y_RNA.366-201ENST00000365540 102 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 RNU6-746P-201ENST00000384112 109 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 MIR942-201ENST00000401111 86 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 MIR18B-201ENST00000454574 71 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 RNU5E-3P-201ENST00000515913 68 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 AL391516.1-201ENST00000554380 2449 ntBASIC1.31□□□□□ -2.2
CNGA1P29973 MIR30D-201ENST00000362283 70 ntBASIC1.3□□□□□ -2.2
CNGA1P29973 RNU7-113P-201ENST00000459273 62 ntBASIC1.3□□□□□ -2.2
CNGA1P29973 MIR3133-201ENST00000583157 78 ntBASIC1.3□□□□□ -2.2
CNGA1P29973 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.3□□□□□ -2.2
CNGA1P29973 AL662814.1-201ENST00000617364 121 ntBASIC1.3□□□□□ -2.2
CNGA1P29973 Y_RNA.114-201ENST00000363265 113 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 RNU6-934P-201ENST00000365154 107 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 MTND4LP9-201ENST00000427694 174 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 AC067940.1-201ENST00000458411 300 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 RNU7-164P-201ENST00000459221 62 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 OR2A41P-201ENST00000473586 105 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 AL137067.1-201ENST00000615933 120 ntBASIC1.29□□□□□ -2.2
CNGA1P29973 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 Y_RNA.470-201ENST00000384307 117 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 SNORA40-201ENST00000388090 126 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 MIR1827-201ENST00000408549 66 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 RNU6-257P-201ENST00000410238 98 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 RNA5SP237-201ENST00000410414 113 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 SNORD83.1-201ENST00000411362 77 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 AL512326.2-201ENST00000426359 151 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 RNU7-123P-201ENST00000515911 60 ntBASIC1.28□□□□□ -2.2
CNGA1P29973 RNU6-774P-201ENST00000363238 107 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNU6-647P-201ENST00000364243 107 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 Y_RNA.294-201ENST00000364916 102 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 Y_RNA.298-201ENST00000364960 107 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 SNORD50.2-201ENST00000365465 70 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 SNORA18-201ENST00000384416 132 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 Y_RNA.531-201ENST00000384589 121 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RPS26P5-201ENST00000418544 335 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNA5SP436-201ENST00000516020 115 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 TUG1_4.1-201ENST00000619464 181 ntBASIC1.27□□□□□ -2.21
CNGA1P29973 RNU6-1237P-201ENST00000384777 107 ntBASIC1.26□□□□□ -2.21
CNGA1P29973 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
CNGA1P29973 PDCD5P2-201ENST00000507570 312 ntBASIC1.26□□□□□ -2.21
CNGA1P29973 IGKV1-22-201ENST00000524313 326 ntBASIC1.26□□□□□ -2.21
CNGA1P29973 AC141846.1-201ENST00000568348 142 ntBASIC1.26□□□□□ -2.21
CNGA1P29973 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.26□□□□□ -2.21
CNGA1P29973 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CNGA1P29973 RNY4P20-201ENST00000516678 93 ntBASIC1.25□□□□□ -2.21
CNGA1P29973 RNA5SP33-201ENST00000516687 98 ntBASIC1.25□□□□□ -2.21
CNGA1P29973 MIR4771-2-201ENST00000577758 74 ntBASIC1.25□□□□□ -2.21
CNGA1P29973 MIR4771-1-201ENST00000582617 74 ntBASIC1.25□□□□□ -2.21
CNGA1P29973 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CNGA1P29973 MIR1-1-201ENST00000362147 71 ntBASIC1.24□□□□□ -2.21
CNGA1P29973 RNU6-1086P-201ENST00000410930 100 ntBASIC1.24□□□□□ -2.21
CNGA1P29973 AL158147.1-201ENST00000443970 75 ntBASIC1.24□□□□□ -2.21
CNGA1P29973 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.24□□□□□ -2.21
CNGA1P29973 AL136317.1-201ENST00000612653 226 ntBASIC1.24□□□□□ -2.21
CNGA1P29973 Y_RNA.205-201ENST00000364128 113 ntBASIC1.23□□□□□ -2.21
CNGA1P29973 SNORD89-201ENST00000390981 114 ntBASIC1.23□□□□□ -2.21
CNGA1P29973 Y_RNA.586-201ENST00000391146 98 ntBASIC1.23□□□□□ -2.21
CNGA1P29973 RNU7-35P-201ENST00000517174 62 ntBASIC1.23□□□□□ -2.21
CNGA1P29973 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
CNGA1P29973 RNU6-187P-201ENST00000384139 106 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 MIR548M-201ENST00000408260 86 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 AC015818.7-201ENST00000428754 109 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 AC087499.7-201ENST00000441958 109 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.22□□□□□ -2.21
CNGA1P29973 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 RN7SKP19-201ENST00000516016 252 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 MIR548AE2-201ENST00000583456 67 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 AC020891.4-201ENST00000605745 93 ntBASIC1.22□□□□□ -2.21
CNGA1P29973 RNU6-949P-201ENST00000384040 107 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 Y_RNA.617-201ENST00000410920 90 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 MIR4676-201ENST00000583078 72 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 AC023934.1-201ENST00000574529 2389 ntBASIC1.21□□□□□ -2.22
CNGA1P29973 RNY1P13-201ENST00000365030 105 ntBASIC1.2□□□□□ -2.22
CNGA1P29973 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
CNGA1P29973 MIR1257-201ENST00000408490 117 ntBASIC1.2□□□□□ -2.22
CNGA1P29973 RNU6-704P-201ENST00000364162 103 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 Y_RNA.299-201ENST00000364973 94 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 RNU7-79P-201ENST00000516082 62 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 AC022523.2-201ENST00000561045 150 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 MIR4804-201ENST00000581683 73 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 AC025627.3-201ENST00000582078 182 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CNGA1P29973 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms