Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR1255B1-201ENST00000636325 63 ntBASIC1.46□□□□□ -2.18
CD40P25942 AC008163.1-202ENST00000636004 2889 ntBASIC1.46□□□□□ -2.18
CD40P25942 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
CD40P25942 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CD40P25942 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
CD40P25942 Y_RNA.140-201ENST00000363474 103 ntBASIC1.45□□□□□ -2.18
CD40P25942 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.45□□□□□ -2.18
CD40P25942 RNU7-90P-201ENST00000459216 62 ntBASIC1.45□□□□□ -2.18
CD40P25942 SNORD67.1-201ENST00000516618 108 ntBASIC1.45□□□□□ -2.18
CD40P25942 RNU6-919P-201ENST00000516731 104 ntBASIC1.45□□□□□ -2.18
CD40P25942 AC012493.3-201ENST00000604494 112 ntBASIC1.45□□□□□ -2.18
CD40P25942 MIR30D-201ENST00000362283 70 ntBASIC1.44□□□□□ -2.18
CD40P25942 SNORD113.3-201ENST00000364630 78 ntBASIC1.44□□□□□ -2.18
CD40P25942 Y_RNA.281-201ENST00000364774 94 ntBASIC1.44□□□□□ -2.18
CD40P25942 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
CD40P25942 RNU6-412P-201ENST00000516434 106 ntBASIC1.44□□□□□ -2.18
CD40P25942 SNORA25-201ENST00000384384 134 ntBASIC1.43□□□□□ -2.18
CD40P25942 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
CD40P25942 AL035461.1-201ENST00000421490 332 ntBASIC1.43□□□□□ -2.18
CD40P25942 AC063976.4-201ENST00000421971 163 ntBASIC1.43□□□□□ -2.18
CD40P25942 RPL39P25-201ENST00000449384 154 ntBASIC1.43□□□□□ -2.18
CD40P25942 snoU13.21-201ENST00000459368 105 ntBASIC1.43□□□□□ -2.18
CD40P25942 SNORA4-201ENST00000584302 138 ntBASIC1.43□□□□□ -2.18
CD40P25942 AC012676.2-201ENST00000619258 186 ntBASIC1.43□□□□□ -2.18
CD40P25942 Y_RNA.85-201ENST00000363014 111 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNU6-949P-201ENST00000384040 107 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNU6-816P-201ENST00000390914 107 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNY4P18-201ENST00000391107 89 ntBASIC1.42□□□□□ -2.18
CD40P25942 SNORA17.3-201ENST00000391159 129 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNU6-1268P-201ENST00000391214 107 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNU6-1239P-201ENST00000391310 107 ntBASIC1.42□□□□□ -2.18
CD40P25942 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
CD40P25942 RPL39P34-201ENST00000477141 156 ntBASIC1.42□□□□□ -2.18
CD40P25942 RNU7-137P-201ENST00000516788 62 ntBASIC1.42□□□□□ -2.18
CD40P25942 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.42□□□□□ -2.18
CD40P25942 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
CD40P25942 AC106800.4-201ENST00000614905 153 ntBASIC1.42□□□□□ -2.18
CD40P25942 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
CD40P25942 AL162726.3-218ENST00000636401 95 ntBASIC1.42□□□□□ -2.18
CD40P25942 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CD40P25942 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CD40P25942 RNU6-1107P-201ENST00000364817 104 ntBASIC1.41□□□□□ -2.18
CD40P25942 SNORA22-201ENST00000383907 134 ntBASIC1.41□□□□□ -2.18
CD40P25942 RNU6-44P-201ENST00000384045 107 ntBASIC1.41□□□□□ -2.18
CD40P25942 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
CD40P25942 Y_RNA.507-201ENST00000384500 99 ntBASIC1.41□□□□□ -2.18
CD40P25942 MIR206-201ENST00000384872 86 ntBASIC1.41□□□□□ -2.18
CD40P25942 MT-TF-201ENST00000387314 71 ntBASIC1.41□□□□□ -2.18
CD40P25942 SNORD12-201ENST00000391002 90 ntBASIC1.41□□□□□ -2.18
CD40P25942 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
CD40P25942 SNORD83.1-201ENST00000411362 77 ntBASIC1.41□□□□□ -2.18
CD40P25942 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.41□□□□□ -2.18
CD40P25942 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CD40P25942 Y_RNA.49-201ENST00000362714 112 ntBASIC1.4□□□□□ -2.19
CD40P25942 RNU4-67P-201ENST00000364569 141 ntBASIC1.4□□□□□ -2.19
CD40P25942 SNORD48-201ENST00000364953 64 ntBASIC1.4□□□□□ -2.19
CD40P25942 Y_RNA.309-201ENST00000365046 111 ntBASIC1.4□□□□□ -2.19
CD40P25942 RNU7-2P-201ENST00000516096 62 ntBASIC1.4□□□□□ -2.19
CD40P25942 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
CD40P25942 MIR3122-201ENST00000577243 73 ntBASIC1.4□□□□□ -2.19
CD40P25942 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CD40P25942 SNORD114-10-201ENST00000363409 72 ntBASIC1.39□□□□□ -2.19
CD40P25942 Y_RNA.155-201ENST00000363632 101 ntBASIC1.39□□□□□ -2.19
CD40P25942 U8.6-201ENST00000364939 135 ntBASIC1.39□□□□□ -2.19
CD40P25942 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CD40P25942 MIR1912-201ENST00000410389 80 ntBASIC1.39□□□□□ -2.19
CD40P25942 RNU6-994P-201ENST00000410507 111 ntBASIC1.39□□□□□ -2.19
CD40P25942 SNORA7.5-201ENST00000410672 110 ntBASIC1.39□□□□□ -2.19
CD40P25942 AC002429.1-201ENST00000437672 148 ntBASIC1.39□□□□□ -2.19
CD40P25942 MIR18B-201ENST00000454574 71 ntBASIC1.39□□□□□ -2.19
CD40P25942 RNU6-521P-201ENST00000516663 105 ntBASIC1.39□□□□□ -2.19
CD40P25942 AC068339.1-201ENST00000526965 141 ntBASIC1.39□□□□□ -2.19
CD40P25942 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
CD40P25942 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.39□□□□□ -2.19
CD40P25942 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CD40P25942 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
CD40P25942 SNORA63.4-201ENST00000362763 126 ntBASIC1.38□□□□□ -2.19
CD40P25942 RNU6-363P-201ENST00000362895 105 ntBASIC1.38□□□□□ -2.19
CD40P25942 SNORD115-35-201ENST00000365122 82 ntBASIC1.38□□□□□ -2.19
CD40P25942 RNU6-934P-201ENST00000365154 107 ntBASIC1.38□□□□□ -2.19
CD40P25942 U8.15-201ENST00000390947 134 ntBASIC1.38□□□□□ -2.19
CD40P25942 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.38□□□□□ -2.19
CD40P25942 AC015818.7-201ENST00000428754 109 ntBASIC1.38□□□□□ -2.19
CD40P25942 AC087499.7-201ENST00000441958 109 ntBASIC1.38□□□□□ -2.19
CD40P25942 MIR4303-201ENST00000581299 66 ntBASIC1.38□□□□□ -2.19
CD40P25942 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
CD40P25942 AC023934.1-201ENST00000574529 2389 ntBASIC1.37□□□□□ -2.19
CD40P25942 Y_RNA.448-201ENST00000384185 108 ntBASIC1.37□□□□□ -2.19
CD40P25942 RNU6-1321P-201ENST00000390905 107 ntBASIC1.37□□□□□ -2.19
CD40P25942 RNU6-1307P-201ENST00000391012 103 ntBASIC1.37□□□□□ -2.19
CD40P25942 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
CD40P25942 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
CD40P25942 MIR4771-2-201ENST00000577758 74 ntBASIC1.37□□□□□ -2.19
CD40P25942 MIR5009-201ENST00000578736 100 ntBASIC1.37□□□□□ -2.19
CD40P25942 MIR4771-1-201ENST00000582617 74 ntBASIC1.37□□□□□ -2.19
CD40P25942 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CD40P25942 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
CD40P25942 Y_RNA.323-201ENST00000365157 109 ntBASIC1.36□□□□□ -2.19
CD40P25942 RNU6-1014P-201ENST00000383940 103 ntBASIC1.36□□□□□ -2.19
CD40P25942 RNU6-409P-201ENST00000384114 104 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms