Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RNA5SP62-201ENST00000363457 110 ntBASIC1.3□□□□□ -2.2
NCLP19338 RNU6-1187P-201ENST00000364771 110 ntBASIC1.3□□□□□ -2.2
NCLP19338 RNU6-915P-201ENST00000364943 103 ntBASIC1.3□□□□□ -2.2
NCLP19338 RNU6-580P-201ENST00000365159 107 ntBASIC1.3□□□□□ -2.2
NCLP19338 RNU6-690P-201ENST00000365242 106 ntBASIC1.3□□□□□ -2.2
NCLP19338 Y_RNA.420-201ENST00000384043 110 ntBASIC1.3□□□□□ -2.2
NCLP19338 MIR6841-201ENST00000637129 72 ntBASIC1.3□□□□□ -2.2
NCLP19338 SNORA22.1-201ENST00000362701 134 ntBASIC1.29□□□□□ -2.2
NCLP19338 RNU6-309P-201ENST00000364573 106 ntBASIC1.29□□□□□ -2.2
NCLP19338 RNA5SP457-201ENST00000363657 124 ntBASIC1.28□□□□□ -2.2
NCLP19338 RNU4-16P-201ENST00000364737 141 ntBASIC1.28□□□□□ -2.2
NCLP19338 Y_RNA.651-201ENST00000459380 103 ntBASIC1.28□□□□□ -2.2
NCLP19338 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.28□□□□□ -2.2
NCLP19338 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.28□□□□□ -2.2
NCLP19338 RNU6-746P-201ENST00000384112 109 ntBASIC1.27□□□□□ -2.21
NCLP19338 RPL39P28-201ENST00000465655 155 ntBASIC1.27□□□□□ -2.21
NCLP19338 RNU6-426P-201ENST00000516464 97 ntBASIC1.27□□□□□ -2.21
NCLP19338 AC133485.4-201ENST00000561835 220 ntBASIC1.27□□□□□ -2.21
NCLP19338 AC138907.4-201ENST00000570107 226 ntBASIC1.27□□□□□ -2.21
NCLP19338 Y_RNA.757-201ENST00000578934 114 ntBASIC1.27□□□□□ -2.21
NCLP19338 MIR3121-201ENST00000579680 77 ntBASIC1.27□□□□□ -2.21
NCLP19338 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
NCLP19338 RNU1-36P-201ENST00000365130 165 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU6-35P-201ENST00000384530 107 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNA5SP144-201ENST00000410846 116 ntBASIC1.26□□□□□ -2.21
NCLP19338 AL022718.1-201ENST00000412004 84 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU7-62P-201ENST00000458856 62 ntBASIC1.26□□□□□ -2.21
NCLP19338 snoU13.2-201ENST00000459201 104 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU6-240P-201ENST00000516098 97 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU6-346P-201ENST00000516288 111 ntBASIC1.26□□□□□ -2.21
NCLP19338 Y_RNA.703-201ENST00000516846 111 ntBASIC1.26□□□□□ -2.21
NCLP19338 U7.2-201ENST00000607576 63 ntBASIC1.26□□□□□ -2.21
NCLP19338 AC010332.2-201ENST00000613083 1904 ntBASIC1.26□□□□□ -2.21
NCLP19338 RNU6-1335P-201ENST00000365426 107 ntBASIC1.25□□□□□ -2.21
NCLP19338 Y_RNA.568-201ENST00000384742 113 ntBASIC1.25□□□□□ -2.21
NCLP19338 MIR588-201ENST00000384900 83 ntBASIC1.25□□□□□ -2.21
NCLP19338 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
NCLP19338 U7.7-201ENST00000459276 60 ntBASIC1.25□□□□□ -2.21
NCLP19338 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
NCLP19338 MIR4305-201ENST00000583252 102 ntBASIC1.25□□□□□ -2.21
NCLP19338 AL136317.1-201ENST00000612653 226 ntBASIC1.25□□□□□ -2.21
NCLP19338 RNU6-508P-201ENST00000363231 103 ntBASIC1.24□□□□□ -2.21
NCLP19338 SNORD12C-201ENST00000386307 89 ntBASIC1.24□□□□□ -2.21
NCLP19338 MIR5000-201ENST00000577717 103 ntBASIC1.24□□□□□ -2.21
NCLP19338 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.24□□□□□ -2.21
NCLP19338 TUG1_4.1-201ENST00000619464 181 ntBASIC1.24□□□□□ -2.21
NCLP19338 AL627230.5-201ENST00000619807 58 ntBASIC1.24□□□□□ -2.21
NCLP19338 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NCLP19338 MIR1-1-201ENST00000362147 71 ntBASIC1.23□□□□□ -2.21
NCLP19338 MIR193B-201ENST00000384907 83 ntBASIC1.23□□□□□ -2.21
NCLP19338 MIR100-201ENST00000385259 80 ntBASIC1.23□□□□□ -2.21
NCLP19338 SNORA40-201ENST00000388090 126 ntBASIC1.23□□□□□ -2.21
NCLP19338 AC098934.3-201ENST00000430450 190 ntBASIC1.23□□□□□ -2.21
NCLP19338 MIR1273G-201ENST00000577677 100 ntBASIC1.23□□□□□ -2.21
NCLP19338 MIR3133-201ENST00000583157 78 ntBASIC1.23□□□□□ -2.21
NCLP19338 AC021443.1-201ENST00000604478 211 ntBASIC1.23□□□□□ -2.21
NCLP19338 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
NCLP19338 Y_RNA.294-201ENST00000364916 102 ntBASIC1.22□□□□□ -2.21
NCLP19338 MIR608-201ENST00000384820 100 ntBASIC1.22□□□□□ -2.21
NCLP19338 RNU7-113P-201ENST00000459273 62 ntBASIC1.22□□□□□ -2.21
NCLP19338 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
NCLP19338 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
NCLP19338 AL137067.1-201ENST00000615933 120 ntBASIC1.22□□□□□ -2.21
NCLP19338 MIR6740-201ENST00000618268 113 ntBASIC1.22□□□□□ -2.21
NCLP19338 RNU6-647P-201ENST00000364243 107 ntBASIC1.21□□□□□ -2.22
NCLP19338 SNORD50.2-201ENST00000365465 70 ntBASIC1.21□□□□□ -2.22
NCLP19338 MIR605-201ENST00000385078 83 ntBASIC1.21□□□□□ -2.22
NCLP19338 MIR563-201ENST00000385080 79 ntBASIC1.21□□□□□ -2.22
NCLP19338 MIR548M-201ENST00000408260 86 ntBASIC1.21□□□□□ -2.22
NCLP19338 RNU6-1165P-201ENST00000410119 107 ntBASIC1.21□□□□□ -2.22
NCLP19338 MIR18B-201ENST00000454574 71 ntBASIC1.21□□□□□ -2.22
NCLP19338 RNU7-164P-201ENST00000459221 62 ntBASIC1.21□□□□□ -2.22
NCLP19338 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
NCLP19338 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
NCLP19338 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
NCLP19338 PSMC1P5-201ENST00000512850 177 ntBASIC1.21□□□□□ -2.22
NCLP19338 RNA5SP272-201ENST00000516095 111 ntBASIC1.21□□□□□ -2.22
NCLP19338 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
NCLP19338 MIR6086-201ENST00000638065 55 ntBASIC1.21□□□□□ -2.22
NCLP19338 AC023934.1-201ENST00000574529 2389 ntBASIC1.2□□□□□ -2.22
NCLP19338 SNORD115-2-201ENST00000362842 82 ntBASIC1.2□□□□□ -2.22
NCLP19338 RNA5SP257-201ENST00000363023 116 ntBASIC1.2□□□□□ -2.22
NCLP19338 Y_RNA.114-201ENST00000363265 113 ntBASIC1.2□□□□□ -2.22
NCLP19338 SNORD115-20-201ENST00000365099 82 ntBASIC1.2□□□□□ -2.22
NCLP19338 Y_RNA.366-201ENST00000365540 102 ntBASIC1.2□□□□□ -2.22
NCLP19338 RNA5SP237-201ENST00000410414 113 ntBASIC1.2□□□□□ -2.22
NCLP19338 SNORD83.1-201ENST00000411362 77 ntBASIC1.2□□□□□ -2.22
NCLP19338 MTND4LP9-201ENST00000427694 174 ntBASIC1.2□□□□□ -2.22
NCLP19338 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
NCLP19338 Y_RNA.171-201ENST00000363760 102 ntBASIC1.19□□□□□ -2.22
NCLP19338 RNU6-934P-201ENST00000365154 107 ntBASIC1.19□□□□□ -2.22
NCLP19338 MT-TF-201ENST00000387314 71 ntBASIC1.19□□□□□ -2.22
NCLP19338 RNU6-1258P-201ENST00000516911 111 ntBASIC1.19□□□□□ -2.22
NCLP19338 RNU6-774P-201ENST00000363238 107 ntBASIC1.18□□□□□ -2.22
NCLP19338 Y_RNA.531-201ENST00000384589 121 ntBASIC1.18□□□□□ -2.22
NCLP19338 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
NCLP19338 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
NCLP19338 RNU6-257P-201ENST00000410238 98 ntBASIC1.18□□□□□ -2.22
NCLP19338 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms