Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNA5SP26-201ENST00000362406 119 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 RNU6-899P-201ENST00000363947 107 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 MIR1285-2-201ENST00000408311 88 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 SNX3P1X-201ENST00000414887 175 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 RNU6-311P-201ENST00000516224 102 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 MIR4308-201ENST00000580634 81 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 MIR6888-201ENST00000621977 67 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 AC068137.3-201ENST00000639191 341 ntBASIC-2.22□□□□□ -2.76
HIST1H1DP16402 MIR516A2-201ENST00000384888 90 ntBASIC-2.23□□□□□ -2.77
HIST1H1DP16402 MIR516A1-201ENST00000385033 90 ntBASIC-2.23□□□□□ -2.77
HIST1H1DP16402 RNU7-48P-201ENST00000458875 63 ntBASIC-2.23□□□□□ -2.77
HIST1H1DP16402 RNU7-113P-201ENST00000459273 62 ntBASIC-2.23□□□□□ -2.77
HIST1H1DP16402 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.23□□□□□ -2.77
HIST1H1DP16402 MIR548AE2-201ENST00000583456 67 ntBASIC-2.23□□□□□ -2.77
HIST1H1DP16402 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 RNU6-54P-201ENST00000365563 107 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 MIR1270-201ENST00000459320 83 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 TRDV1-202ENST00000621643 102 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 AC112487.2-201ENST00000637950 304 ntBASIC-2.24□□□□□ -2.77
HIST1H1DP16402 RNU6-1205P-201ENST00000363625 106 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 RNA5SP86-201ENST00000390869 98 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.25□□□□□ -2.77
HIST1H1DP16402 AL606845.1-201ENST00000404881 255 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 RNA5SP144-201ENST00000410846 116 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 MTCO2P24-201ENST00000515611 426 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 MIR1244-1-201ENST00000612829 85 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 AL445584.3-201ENST00000617173 78 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 MIR1244-3-201ENST00000635744 85 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 MIR1244-2-201ENST00000636449 85 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 MIR1244-4-202ENST00000636813 85 ntBASIC-2.25□□□□□ -2.77
HIST1H1DP16402 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 SNORD115-20-201ENST00000365099 82 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 SNORA26.4-201ENST00000391188 123 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 RNU6-466P-201ENST00000391224 103 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 RPS29P25-201ENST00000481709 171 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 RNU6-759P-201ENST00000516740 103 ntBASIC-2.26□□□□□ -2.77
HIST1H1DP16402 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.26□□□□□ -2.77
HIST1H1DP16402 Y_RNA.35-201ENST00000362601 101 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 SNORD115-33-201ENST00000363723 82 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 AC097639.2-201ENST00000603159 172 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 AC092794.2-201ENST00000620933 563 ntBASIC-2.27□□□□□ -2.77
HIST1H1DP16402 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 RNU6-553P-201ENST00000364047 96 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 RNU6-164P-201ENST00000364604 103 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 MIR2053-201ENST00000459295 91 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 MIR4659A-201ENST00000580269 81 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 MIR3129-201ENST00000581095 76 ntBASIC-2.28□□□□□ -2.77
HIST1H1DP16402 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 RNU6-540P-201ENST00000384622 101 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 MIR601-201ENST00000385256 79 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 MIR548H1-201ENST00000408610 102 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.29□□□□□ -2.78
HIST1H1DP16402 SNORD42B-201ENST00000458893 67 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 RNU6-850P-201ENST00000516934 103 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 MRPS36P3-201ENST00000519284 130 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 AC060788.1-201ENST00000521318 469 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 AC133104.2-201ENST00000615272 193 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 AF246928.1-201ENST00000623768 87 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 AP001362.1-201ENST00000625165 124 ntBASIC-2.29□□□□□ -2.78
HIST1H1DP16402 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 RNU4-10P-201ENST00000364383 140 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 MIR206-201ENST00000384872 86 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 MTND3P12-201ENST00000559068 328 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 MIR6128-201ENST00000615528 109 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.3□□□□□ -2.78
HIST1H1DP16402 MIR367-201ENST00000362299 68 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 Y_RNA.303-201ENST00000364998 94 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 SNORA69.1-201ENST00000390904 137 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 RNU6-1129P-201ENST00000515964 104 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 RNU7-70P-201ENST00000516941 66 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 MIR3942-201ENST00000585264 109 ntBASIC-2.31□□□□□ -2.78
HIST1H1DP16402 MIR365A-201ENST00000362260 87 ntBASIC-2.32□□□□□ -2.78
HIST1H1DP16402 SNORD115-22-201ENST00000364456 82 ntBASIC-2.32□□□□□ -2.78
HIST1H1DP16402 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.32□□□□□ -2.78
HIST1H1DP16402 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.32□□□□□ -2.78
HIST1H1DP16402 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.32□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms