Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR4752-201ENST00000579672 72 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 MIR4639-201ENST00000584938 69 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 AC091304.10-201ENST00000641554 121 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 MIR330-201ENST00000362196 94 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-238P-201ENST00000363313 106 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 SNORD116-25-201ENST00000516517 92 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-531P-201ENST00000516694 104 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 RNU6-135P-201ENST00000516769 101 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.03□□□□□ -2.41
HLA-DPB1P04440 SNORA63.5-201ENST00000363548 123 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU6-103P-201ENST00000363686 107 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU6-472P-201ENST00000384299 107 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR760-201ENST00000390220 80 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR1197-201ENST00000408818 88 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNA5SP127-201ENST00000411051 133 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU7-79P-201ENST00000516082 62 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR378D2-201ENST00000580636 98 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR4744-201ENST00000581563 82 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 RNU1-29P-201ENST00000606574 126 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR8087-201ENST00000612745 78 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 MIR8062-201ENST00000621515 85 ntBASIC-0.04□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 MIR624-201ENST00000385217 97 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 MIR643-201ENST00000385267 97 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 MIR1302-6-201ENST00000408466 90 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.05□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 SNORA2A-201ENST00000383885 135 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 RNU6-578P-201ENST00000390980 103 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 RNA5SP480-201ENST00000516840 109 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 DEFB131E-201ENST00000532329 154 ntBASIC-0.06□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNU6-797P-201ENST00000363101 109 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNA5SP133-201ENST00000363368 119 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 SNORD114-26-201ENST00000363543 72 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNU6-493P-201ENST00000391321 108 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNA5SP144-201ENST00000410846 116 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 AC108059.2-201ENST00000434626 151 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNA5SP330-201ENST00000517096 96 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNU7-35P-201ENST00000517174 62 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 RNU2-4P-201ENST00000606190 192 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 MIR499B-201ENST00000636498 73 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 U6.109-201ENST00000636749 87 ntBASIC-0.07□□□□□ -2.42
HLA-DPB1P04440 MIR411-201ENST00000362239 96 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 RNA5SP325-201ENST00000363756 130 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 RNA5SP128-201ENST00000365305 116 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 RNU6-716P-201ENST00000365621 103 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 RNY1P6-201ENST00000384193 109 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 SNORA32-201ENST00000384072 121 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 MIR548F4-201ENST00000408515 105 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 AC138749.4-201ENST00000563970 127 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 AC044792.1-201ENST00000593294 196 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.09□□□□□ -2.42
HLA-DPB1P04440 RNU4-58P-201ENST00000363192 141 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 RNU2-38P-201ENST00000410856 79 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 RNU6-893P-201ENST00000458841 100 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 RNU7-113P-201ENST00000459273 62 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 AP003072.1-201ENST00000531740 145 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 MIR4768-201ENST00000585270 74 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 AC006504.6-201ENST00000590142 199 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 AL359881.1-201ENST00000602916 267 ntBASIC-0.1□□□□□ -2.43
HLA-DPB1P04440 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms