Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-1020P-201ENST00000363684 107 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 RNU6-275P-201ENST00000364910 107 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 RNU6-1292P-201ENST00000383856 107 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 RNU6-918P-201ENST00000391219 106 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 RNU7-56P-201ENST00000458744 62 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 AC130289.1-201ENST00000577321 73 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 MIR3612-201ENST00000579753 87 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 AL365205.2-201ENST00000594586 68 ntBASIC0.54□□□□□ -2.32
PDGFBP01127 MIR411-201ENST00000362239 96 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-403P-201ENST00000363163 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1319P-201ENST00000390855 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-747P-201ENST00000390928 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-241P-201ENST00000391148 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-447P-201ENST00000410293 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1118P-201ENST00000410382 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1076P-201ENST00000410397 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-355P-201ENST00000410427 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-791P-201ENST00000410467 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNA5SP261-201ENST00000410536 106 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-705P-201ENST00000410601 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1100P-201ENST00000410691 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-860P-201ENST00000410860 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-177P-201ENST00000411257 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1217P-201ENST00000411276 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-785P-201ENST00000411324 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU7-102P-201ENST00000458948 62 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1219P-201ENST00000516143 112 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 RNU6-1271P-201ENST00000517049 105 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 U6.90-201ENST00000614007 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 U6.70-201ENST00000620287 104 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 AC021613.1-201ENST00000623880 111 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
PDGFBP01127 SNORA22.1-201ENST00000362701 134 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 MIR573-201ENST00000384964 99 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 MIR125B2-201ENST00000385128 89 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 MRPS18CP4-201ENST00000535821 231 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 AC078938.1-201ENST00000620993 318 ntBASIC0.52□□□□□ -2.33
PDGFBP01127 MIR30D-201ENST00000362283 70 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 RNU6-1082P-201ENST00000364574 107 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 Y_RNA.489-201ENST00000384410 101 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 RNU6-768P-201ENST00000384683 107 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 SNORD58.1-201ENST00000391313 66 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 RNU6-388P-201ENST00000517012 105 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 RNU6-389P-201ENST00000517048 105 ntBASIC0.51□□□□□ -2.33
PDGFBP01127 Y_RNA.171-201ENST00000363760 102 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 Y_RNA.188-201ENST00000363952 111 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 SNORA18-201ENST00000384416 132 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 SNORA72.6-201ENST00000384520 129 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 RNU4-83P-201ENST00000410863 133 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 Y_RNA.617-201ENST00000410920 90 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 SCARNA15-202ENST00000516881 127 ntBASIC0.5□□□□□ -2.33
PDGFBP01127 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 Y_RNA.75-201ENST00000362927 97 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 Y_RNA.297-201ENST00000364950 91 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 RNU4-45P-201ENST00000365469 141 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 RNU5E-3P-201ENST00000515913 68 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
PDGFBP01127 SNORA32-201ENST00000384072 121 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 MIR624-201ENST00000385217 97 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 SNORD37.2-201ENST00000391075 66 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 RNU6-588P-201ENST00000410281 105 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
PDGFBP01127 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 MIR4431-201ENST00000579990 94 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 MIR4636-201ENST00000582271 80 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 MIR6759-201ENST00000638110 65 ntBASIC0.48□□□□□ -2.33
PDGFBP01127 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
PDGFBP01127 Y_RNA.52-201ENST00000362760 96 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 Y_RNA.233-201ENST00000364407 101 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 Y_RNA.357-201ENST00000365487 109 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 MIR563-201ENST00000385080 79 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 U8.15-201ENST00000390947 134 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 Y_RNA.793-201ENST00000411222 111 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 RNU6-1258P-201ENST00000516911 111 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 AC141846.1-201ENST00000568348 142 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.47□□□□□ -2.33
PDGFBP01127 AC023932.2-201ENST00000603176 175 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 AC009779.6-201ENST00000603972 165 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 MIR6844-201ENST00000637122 62 ntBASIC0.47□□□□□ -2.33
PDGFBP01127 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
PDGFBP01127 Y_RNA.13-201ENST00000362403 112 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 RNU6-379P-201ENST00000363813 104 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 RNU6-818P-201ENST00000364837 108 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 Y_RNA.515-201ENST00000384535 112 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 MT-TF-201ENST00000387314 71 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 RNU6-1086P-201ENST00000410930 100 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 Y_RNA.644-201ENST00000459006 113 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms