Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 U6.106-201ENST00000636360 105 ntBASIC0.42□□□□□ -2.34
PGK1P00558 SNORA22.1-201ENST00000362701 134 ntBASIC0.41□□□□□ -2.34
PGK1P00558 Y_RNA.75-201ENST00000362927 97 ntBASIC0.41□□□□□ -2.34
PGK1P00558 RNU4-16P-201ENST00000364737 141 ntBASIC0.41□□□□□ -2.34
PGK1P00558 Y_RNA.452-201ENST00000384202 108 ntBASIC0.41□□□□□ -2.34
PGK1P00558 RNU4-70P-201ENST00000384579 139 ntBASIC0.41□□□□□ -2.34
PGK1P00558 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
PGK1P00558 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
PGK1P00558 SNORA62.5-201ENST00000516634 120 ntBASIC0.41□□□□□ -2.34
PGK1P00558 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.41□□□□□ -2.34
PGK1P00558 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.41□□□□□ -2.34
PGK1P00558 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
PGK1P00558 MTND5P32-201ENST00000560711 1802 ntBASIC0.41□□□□□ -2.34
PGK1P00558 MIR411-201ENST00000362239 96 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNU6-702P-201ENST00000364982 107 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNU6-47P-201ENST00000383866 107 ntBASIC0.4□□□□□ -2.35
PGK1P00558 Y_RNA.433-201ENST00000384089 102 ntBASIC0.4□□□□□ -2.35
PGK1P00558 Y_RNA.435-201ENST00000384095 112 ntBASIC0.4□□□□□ -2.35
PGK1P00558 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNU6-364P-201ENST00000384387 107 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNA5SP261-201ENST00000410536 106 ntBASIC0.4□□□□□ -2.35
PGK1P00558 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.4□□□□□ -2.35
PGK1P00558 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
PGK1P00558 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.4□□□□□ -2.35
PGK1P00558 RNU6-1258P-201ENST00000516911 111 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNU7-156P-201ENST00000517214 74 ntBASIC0.4□□□□□ -2.35
PGK1P00558 AC141846.1-201ENST00000568348 142 ntBASIC0.4□□□□□ -2.35
PGK1P00558 RNU6-196P-201ENST00000384315 107 ntBASIC0.39□□□□□ -2.35
PGK1P00558 U8.15-201ENST00000390947 134 ntBASIC0.39□□□□□ -2.35
PGK1P00558 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.39□□□□□ -2.35
PGK1P00558 RNA5SP236-201ENST00000516169 116 ntBASIC0.39□□□□□ -2.35
PGK1P00558 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
PGK1P00558 Y_RNA.52-201ENST00000362760 96 ntBASIC0.38□□□□□ -2.35
PGK1P00558 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
PGK1P00558 Y_RNA.588-201ENST00000391254 102 ntBASIC0.38□□□□□ -2.35
PGK1P00558 Y_RNA.617-201ENST00000410920 90 ntBASIC0.38□□□□□ -2.35
PGK1P00558 MIR3149-201ENST00000584629 83 ntBASIC0.38□□□□□ -2.35
PGK1P00558 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
PGK1P00558 SNORA20-201ENST00000384662 132 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-768P-201ENST00000384683 107 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-447P-201ENST00000410293 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-1118P-201ENST00000410382 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-1076P-201ENST00000410397 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNA5SP237-201ENST00000410414 113 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-355P-201ENST00000410427 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-791P-201ENST00000410467 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-705P-201ENST00000410601 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-1100P-201ENST00000410691 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-860P-201ENST00000410860 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-1217P-201ENST00000411276 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNU6-785P-201ENST00000411324 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
PGK1P00558 Y_RNA.757-201ENST00000578934 114 ntBASIC0.37□□□□□ -2.35
PGK1P00558 AC009779.6-201ENST00000603972 165 ntBASIC0.37□□□□□ -2.35
PGK1P00558 AL162730.1-201ENST00000605734 292 ntBASIC0.37□□□□□ -2.35
PGK1P00558 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.37□□□□□ -2.35
PGK1P00558 U6.90-201ENST00000614007 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 U6.70-201ENST00000620287 104 ntBASIC0.37□□□□□ -2.35
PGK1P00558 Y_RNA.200-201ENST00000364018 102 ntBASIC0.36□□□□□ -2.35
PGK1P00558 Y_RNA.274-201ENST00000364714 101 ntBASIC0.36□□□□□ -2.35
PGK1P00558 SNORA20.1-201ENST00000364790 130 ntBASIC0.36□□□□□ -2.35
PGK1P00558 SNORA18-201ENST00000384416 132 ntBASIC0.36□□□□□ -2.35
PGK1P00558 SNORD93-201ENST00000408813 74 ntBASIC0.36□□□□□ -2.35
PGK1P00558 RNU6-1219P-201ENST00000516143 112 ntBASIC0.36□□□□□ -2.35
PGK1P00558 RNU6-448P-201ENST00000517052 107 ntBASIC0.36□□□□□ -2.35
PGK1P00558 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.36□□□□□ -2.35
PGK1P00558 AC130289.1-201ENST00000577321 73 ntBASIC0.36□□□□□ -2.35
PGK1P00558 MIR4431-201ENST00000579990 94 ntBASIC0.36□□□□□ -2.35
PGK1P00558 AL353621.2-201ENST00000605340 133 ntBASIC0.36□□□□□ -2.35
PGK1P00558 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNU6-349P-201ENST00000362402 107 ntBASIC0.35□□□□□ -2.35
PGK1P00558 Y_RNA.144-201ENST00000363521 113 ntBASIC0.35□□□□□ -2.35
PGK1P00558 Y_RNA.171-201ENST00000363760 102 ntBASIC0.35□□□□□ -2.35
PGK1P00558 SNORA25.7-201ENST00000364375 127 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNU4-67P-201ENST00000364569 141 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNU6-1082P-201ENST00000364574 107 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNU6-949P-201ENST00000384040 107 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNY1P6-201ENST00000384193 109 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNA5SP144-201ENST00000410846 116 ntBASIC0.35□□□□□ -2.35
PGK1P00558 RNU7-70P-201ENST00000516941 66 ntBASIC0.35□□□□□ -2.35
PGK1P00558 AC022559.1-201ENST00000520905 205 ntBASIC0.35□□□□□ -2.35
PGK1P00558 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
PGK1P00558 MIR3152-201ENST00000579801 74 ntBASIC0.35□□□□□ -2.35
PGK1P00558 Y_RNA.13-201ENST00000362403 112 ntBASIC0.34□□□□□ -2.36
PGK1P00558 Y_RNA.83-201ENST00000363005 113 ntBASIC0.34□□□□□ -2.36
PGK1P00558 Y_RNA.280-201ENST00000364765 112 ntBASIC0.34□□□□□ -2.36
PGK1P00558 RNY1P13-201ENST00000365030 105 ntBASIC0.34□□□□□ -2.36
PGK1P00558 RNU6-463P-201ENST00000384340 107 ntBASIC0.34□□□□□ -2.36
PGK1P00558 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
PGK1P00558 AC133485.4-201ENST00000561835 220 ntBASIC0.34□□□□□ -2.36
PGK1P00558 Y_RNA.32-201ENST00000362589 110 ntBASIC0.33□□□□□ -2.36
PGK1P00558 RNU6-1020P-201ENST00000363684 107 ntBASIC0.33□□□□□ -2.36
PGK1P00558 Y_RNA.470-201ENST00000384307 117 ntBASIC0.33□□□□□ -2.36
PGK1P00558 RNU2-60P-201ENST00000517290 128 ntBASIC0.33□□□□□ -2.36
PGK1P00558 MIR4491-201ENST00000581087 68 ntBASIC0.33□□□□□ -2.36
PGK1P00558 MIR6082-201ENST00000613604 109 ntBASIC0.33□□□□□ -2.36
PGK1P00558 MIR6718-201ENST00000616153 80 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms