Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.83-201ENST00000363005 113 ntBASIC0.49□□□□□ -2.33
MBD4O95243 Y_RNA.200-201ENST00000364018 102 ntBASIC0.49□□□□□ -2.33
MBD4O95243 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
MBD4O95243 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
MBD4O95243 RNU4-83P-201ENST00000410863 133 ntBASIC0.49□□□□□ -2.33
MBD4O95243 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.49□□□□□ -2.33
MBD4O95243 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.49□□□□□ -2.33
MBD4O95243 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
MBD4O95243 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
MBD4O95243 SNORA25.7-201ENST00000364375 127 ntBASIC0.48□□□□□ -2.33
MBD4O95243 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
MBD4O95243 AL589743.1-201ENST00000551932 2712 ntBASIC0.48□□□□□ -2.33
MBD4O95243 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
MBD4O95243 RNU4-16P-201ENST00000364737 141 ntBASIC0.47□□□□□ -2.33
MBD4O95243 Y_RNA.521-201ENST00000384560 114 ntBASIC0.47□□□□□ -2.33
MBD4O95243 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
MBD4O95243 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.47□□□□□ -2.33
MBD4O95243 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
MBD4O95243 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
MBD4O95243 AC141846.1-201ENST00000568348 142 ntBASIC0.47□□□□□ -2.33
MBD4O95243 RN7SL793P-201ENST00000583259 296 ntBASIC0.47□□□□□ -2.33
MBD4O95243 AC009779.6-201ENST00000603972 165 ntBASIC0.47□□□□□ -2.33
MBD4O95243 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
MBD4O95243 MTND5P32-201ENST00000560711 1802 ntBASIC0.47□□□□□ -2.33
MBD4O95243 Y_RNA.42-201ENST00000362660 108 ntBASIC0.46□□□□□ -2.34
MBD4O95243 SNORD114-26-201ENST00000363543 72 ntBASIC0.46□□□□□ -2.34
MBD4O95243 Y_RNA.435-201ENST00000384095 112 ntBASIC0.46□□□□□ -2.34
MBD4O95243 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
MBD4O95243 RNU6-1219P-201ENST00000516143 112 ntBASIC0.46□□□□□ -2.34
MBD4O95243 AC022559.1-201ENST00000520905 205 ntBASIC0.46□□□□□ -2.34
MBD4O95243 AC130289.1-201ENST00000577321 73 ntBASIC0.46□□□□□ -2.34
MBD4O95243 MIR4431-201ENST00000579990 94 ntBASIC0.46□□□□□ -2.34
MBD4O95243 MIR8066-201ENST00000617280 78 ntBASIC0.46□□□□□ -2.34
MBD4O95243 RNU6-1020P-201ENST00000363684 107 ntBASIC0.45□□□□□ -2.34
MBD4O95243 RNU6-1082P-201ENST00000364574 107 ntBASIC0.45□□□□□ -2.34
MBD4O95243 Y_RNA.274-201ENST00000364714 101 ntBASIC0.45□□□□□ -2.34
MBD4O95243 RNU6-768P-201ENST00000384683 107 ntBASIC0.45□□□□□ -2.34
MBD4O95243 RNA5SP480-201ENST00000516840 109 ntBASIC0.45□□□□□ -2.34
MBD4O95243 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
MBD4O95243 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
MBD4O95243 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
MBD4O95243 Y_RNA.52-201ENST00000362760 96 ntBASIC0.44□□□□□ -2.34
MBD4O95243 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
MBD4O95243 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
MBD4O95243 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
MBD4O95243 RNU6-1258P-201ENST00000516911 111 ntBASIC0.44□□□□□ -2.34
MBD4O95243 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.44□□□□□ -2.34
MBD4O95243 Y_RNA.171-201ENST00000363760 102 ntBASIC0.43□□□□□ -2.34
MBD4O95243 Y_RNA.233-201ENST00000364407 101 ntBASIC0.43□□□□□ -2.34
MBD4O95243 RNU6-949P-201ENST00000384040 107 ntBASIC0.43□□□□□ -2.34
MBD4O95243 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
MBD4O95243 Y_RNA.466-201ENST00000384294 113 ntBASIC0.43□□□□□ -2.34
MBD4O95243 Y_RNA.489-201ENST00000384410 101 ntBASIC0.43□□□□□ -2.34
MBD4O95243 RNU5E-9P-201ENST00000411164 104 ntBASIC0.43□□□□□ -2.34
MBD4O95243 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
MBD4O95243 RNU6-765P-201ENST00000516916 99 ntBASIC0.43□□□□□ -2.34
MBD4O95243 Y_RNA.757-201ENST00000578934 114 ntBASIC0.43□□□□□ -2.34
MBD4O95243 Y_RNA.36-201ENST00000362602 112 ntBASIC0.42□□□□□ -2.34
MBD4O95243 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
MBD4O95243 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
MBD4O95243 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
MBD4O95243 RNY1P6-201ENST00000384193 109 ntBASIC0.42□□□□□ -2.34
MBD4O95243 SNORA18-201ENST00000384416 132 ntBASIC0.42□□□□□ -2.34
MBD4O95243 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
MBD4O95243 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
MBD4O95243 AC096949.1-201ENST00000412047 152 ntBASIC0.42□□□□□ -2.34
MBD4O95243 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.42□□□□□ -2.34
MBD4O95243 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
MBD4O95243 MIR6082-201ENST00000613604 109 ntBASIC0.42□□□□□ -2.34
MBD4O95243 RNU6-403P-201ENST00000363163 104 ntBASIC0.41□□□□□ -2.34
MBD4O95243 RNU6-312P-201ENST00000364629 107 ntBASIC0.41□□□□□ -2.34
MBD4O95243 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
MBD4O95243 AC107027.2-201ENST00000512197 115 ntBASIC0.41□□□□□ -2.34
MBD4O95243 RNA5SP236-201ENST00000516169 116 ntBASIC0.41□□□□□ -2.34
MBD4O95243 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.41□□□□□ -2.34
MBD4O95243 AC078938.1-201ENST00000620993 318 ntBASIC0.41□□□□□ -2.34
MBD4O95243 RNU6-349P-201ENST00000362402 107 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.13-201ENST00000362403 112 ntBASIC0.4□□□□□ -2.35
MBD4O95243 RNU6-379P-201ENST00000363813 104 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.188-201ENST00000363952 111 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.297-201ENST00000364950 91 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.588-201ENST00000391254 102 ntBASIC0.4□□□□□ -2.35
MBD4O95243 RNU6-1086P-201ENST00000410930 100 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.644-201ENST00000459006 113 ntBASIC0.4□□□□□ -2.35
MBD4O95243 Y_RNA.674-201ENST00000516362 113 ntBASIC0.4□□□□□ -2.35
MBD4O95243 RNU6-1271P-201ENST00000517049 105 ntBASIC0.4□□□□□ -2.35
MBD4O95243 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
MBD4O95243 RNU6-818P-201ENST00000364837 108 ntBASIC0.39□□□□□ -2.35
MBD4O95243 RNY1P13-201ENST00000365030 105 ntBASIC0.39□□□□□ -2.35
MBD4O95243 Y_RNA.337-201ENST00000365312 102 ntBASIC0.39□□□□□ -2.35
MBD4O95243 RNA5SP144-201ENST00000410846 116 ntBASIC0.39□□□□□ -2.35
MBD4O95243 MIR4491-201ENST00000581087 68 ntBASIC0.39□□□□□ -2.35
MBD4O95243 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
MBD4O95243 Y_RNA.174-201ENST00000363781 105 ntBASIC0.38□□□□□ -2.35
MBD4O95243 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
MBD4O95243 Y_RNA.470-201ENST00000384307 117 ntBASIC0.38□□□□□ -2.35
MBD4O95243 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
MBD4O95243 Y_RNA.497-201ENST00000384447 98 ntBASIC0.38□□□□□ -2.35
MBD4O95243 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
MBD4O95243 RNU6-588P-201ENST00000410281 105 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms