Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 Y_RNA.226-201ENST00000364337 114 ntBASIC2.31□□□□□ -2.04
ALX3O95076 MIR9-1-201ENST00000385198 89 ntBASIC2.31□□□□□ -2.04
ALX3O95076 SNORA40.18-201ENST00000391200 128 ntBASIC2.31□□□□□ -2.04
ALX3O95076 RNA5SP237-201ENST00000410414 113 ntBASIC2.31□□□□□ -2.04
ALX3O95076 RNU4-83P-201ENST00000410863 133 ntBASIC2.31□□□□□ -2.04
ALX3O95076 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
ALX3O95076 Y_RNA.648-201ENST00000459455 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
ALX3O95076 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.31□□□□□ -2.04
ALX3O95076 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
ALX3O95076 RNU4-32P-201ENST00000363404 141 ntBASIC2.3□□□□□ -2.04
ALX3O95076 Y_RNA.338-201ENST00000365320 114 ntBASIC2.3□□□□□ -2.04
ALX3O95076 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
ALX3O95076 AL138827.1-201ENST00000402666 306 ntBASIC2.3□□□□□ -2.04
ALX3O95076 AC244023.1-201ENST00000426884 112 ntBASIC2.3□□□□□ -2.04
ALX3O95076 AL591806.2-201ENST00000433122 173 ntBASIC2.3□□□□□ -2.04
ALX3O95076 AC108938.1-201ENST00000451204 136 ntBASIC2.3□□□□□ -2.04
ALX3O95076 snoU13.2-201ENST00000459201 104 ntBASIC2.3□□□□□ -2.04
ALX3O95076 snoU13.11-201ENST00000459219 104 ntBASIC2.3□□□□□ -2.04
ALX3O95076 SNORD53-201ENST00000579969 78 ntBASIC2.3□□□□□ -2.04
ALX3O95076 AC242498.1-201ENST00000604134 111 ntBASIC2.3□□□□□ -2.04
ALX3O95076 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.3□□□□□ -2.04
ALX3O95076 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
ALX3O95076 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ALX3O95076 SNORA63.2-201ENST00000362603 126 ntBASIC2.29□□□□□ -2.04
ALX3O95076 RNU6-686P-201ENST00000364839 107 ntBASIC2.29□□□□□ -2.04
ALX3O95076 RNU6-571P-201ENST00000384128 107 ntBASIC2.29□□□□□ -2.04
ALX3O95076 Y_RNA.508-201ENST00000384502 114 ntBASIC2.29□□□□□ -2.04
ALX3O95076 MIR194-1-201ENST00000384892 85 ntBASIC2.29□□□□□ -2.04
ALX3O95076 MIR563-201ENST00000385080 79 ntBASIC2.29□□□□□ -2.04
ALX3O95076 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
ALX3O95076 RNU7-41P-201ENST00000515917 61 ntBASIC2.29□□□□□ -2.04
ALX3O95076 RNU6-850P-201ENST00000516934 103 ntBASIC2.29□□□□□ -2.04
ALX3O95076 AC138749.4-201ENST00000563970 127 ntBASIC2.29□□□□□ -2.04
ALX3O95076 AC090897.1-201ENST00000580909 226 ntBASIC2.29□□□□□ -2.04
ALX3O95076 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
ALX3O95076 Y_RNA.788-201ENST00000622394 112 ntBASIC2.29□□□□□ -2.04
ALX3O95076 AP000648.3-201ENST00000623539 4507 ntBASIC2.29□□□□□ -2.04
ALX3O95076 AC008163.1-202ENST00000636004 2889 ntBASIC2.28□□□□□ -2.04
ALX3O95076 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.28□□□□□ -2.04
ALX3O95076 MIR1287-201ENST00000408492 90 ntBASIC2.28□□□□□ -2.04
ALX3O95076 Y_RNA.660-201ENST00000516002 120 ntBASIC2.28□□□□□ -2.04
ALX3O95076 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
ALX3O95076 RNA5SP99-201ENST00000364020 114 ntBASIC2.27□□□□□ -2.05
ALX3O95076 AC009474.2-201ENST00000451383 136 ntBASIC2.27□□□□□ -2.05
ALX3O95076 MIR4796-201ENST00000580742 81 ntBASIC2.27□□□□□ -2.05
ALX3O95076 MIR4635-201ENST00000583759 79 ntBASIC2.27□□□□□ -2.05
ALX3O95076 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.27□□□□□ -2.05
ALX3O95076 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALX3O95076 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALX3O95076 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
ALX3O95076 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ALX3O95076 RNU6-380P-201ENST00000410207 107 ntBASIC2.26□□□□□ -2.05
ALX3O95076 AC087499.2-201ENST00000432861 149 ntBASIC2.26□□□□□ -2.05
ALX3O95076 RPS27P21-201ENST00000486977 252 ntBASIC2.26□□□□□ -2.05
ALX3O95076 RNU6-322P-201ENST00000516010 103 ntBASIC2.26□□□□□ -2.05
ALX3O95076 RNU6-539P-201ENST00000516665 103 ntBASIC2.26□□□□□ -2.05
ALX3O95076 MIR4500-201ENST00000579472 76 ntBASIC2.26□□□□□ -2.05
ALX3O95076 PRELID3BP2-201ENST00000605362 201 ntBASIC2.26□□□□□ -2.05
ALX3O95076 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ALX3O95076 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
ALX3O95076 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
ALX3O95076 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALX3O95076 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALX3O95076 RNU6-203P-201ENST00000384038 104 ntBASIC2.25□□□□□ -2.05
ALX3O95076 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.25□□□□□ -2.05
ALX3O95076 AC027119.1-201ENST00000440877 241 ntBASIC2.25□□□□□ -2.05
ALX3O95076 AC245517.4-201ENST00000448601 281 ntBASIC2.25□□□□□ -2.05
ALX3O95076 FGF7P7-201ENST00000514120 227 ntBASIC2.25□□□□□ -2.05
ALX3O95076 RNA5SP445-201ENST00000515889 115 ntBASIC2.25□□□□□ -2.05
ALX3O95076 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ALX3O95076 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALX3O95076 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ALX3O95076 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ALX3O95076 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ALX3O95076 RNU1-112P-201ENST00000364401 164 ntBASIC2.24□□□□□ -2.05
ALX3O95076 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
ALX3O95076 AC004965.1-201ENST00000413033 213 ntBASIC2.24□□□□□ -2.05
ALX3O95076 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
ALX3O95076 SCARNA18B-201ENST00000458806 135 ntBASIC2.24□□□□□ -2.05
ALX3O95076 SNORD109B-201ENST00000458961 67 ntBASIC2.24□□□□□ -2.05
ALX3O95076 SNORD109A-201ENST00000459128 67 ntBASIC2.24□□□□□ -2.05
ALX3O95076 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
ALX3O95076 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.24□□□□□ -2.05
ALX3O95076 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
ALX3O95076 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
ALX3O95076 SNORD36A-201ENST00000362874 73 ntBASIC2.23□□□□□ -2.05
ALX3O95076 RNA5SP48-201ENST00000363969 126 ntBASIC2.23□□□□□ -2.05
ALX3O95076 RNU6-411P-201ENST00000384451 107 ntBASIC2.23□□□□□ -2.05
ALX3O95076 MIR520H-201ENST00000385126 88 ntBASIC2.23□□□□□ -2.05
ALX3O95076 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.23□□□□□ -2.05
ALX3O95076 AC005908.1-201ENST00000468701 347 ntBASIC2.23□□□□□ -2.05
ALX3O95076 MIR3134-201ENST00000579433 74 ntBASIC2.23□□□□□ -2.05
ALX3O95076 AL357312.1-201ENST00000603879 298 ntBASIC2.23□□□□□ -2.05
ALX3O95076 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
ALX3O95076 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms