Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.818-201ENST00000618813 71 ntBASIC1.89□□□□□ -2.11
VAMP4O75379 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAMP4O75379 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAMP4O75379 RNU6-1099P-201ENST00000363533 107 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 SNORA18-201ENST00000384416 132 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 AC244023.1-201ENST00000426884 112 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 AL354695.1-201ENST00000427935 228 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 AL603825.1-201ENST00000438481 80 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 AC027119.1-201ENST00000440877 241 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 Y_RNA.677-201ENST00000516401 85 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 RNA5SP170-201ENST00000517150 101 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 AC242498.1-201ENST00000604134 111 ntBASIC1.88□□□□□ -2.11
VAMP4O75379 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VAMP4O75379 Y_RNA.43-201ENST00000362670 111 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 Y_RNA.155-201ENST00000363632 101 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 SNORA32-201ENST00000384072 121 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 MIR590-201ENST00000385008 97 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 snoU13.25-201ENST00000458945 104 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 RNU11-2P-201ENST00000516898 142 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 MIR4694-201ENST00000578534 80 ntBASIC1.87□□□□□ -2.11
VAMP4O75379 RNY3P2-201ENST00000362918 102 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 RNU4-36P-201ENST00000364294 144 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 SNORD115-35-201ENST00000365122 82 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 RNU6-396P-201ENST00000365369 105 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 Y_RNA.348-201ENST00000365403 103 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 Y_RNA.360-201ENST00000365512 102 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 RNU7-79P-201ENST00000516082 62 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 SNORA31.24-201ENST00000517232 57 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 DEFB131E-201ENST00000532329 154 ntBASIC1.86□□□□□ -2.11
VAMP4O75379 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 RNU6-1065P-201ENST00000384513 106 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 Y_RNA.601-201ENST00000410500 113 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 BTF3P4-201ENST00000418852 495 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 RNU1-98P-201ENST00000458992 160 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 RNU6-947P-201ENST00000516264 106 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 Y_RNA.676-201ENST00000516393 96 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 RNU6-521P-201ENST00000516663 105 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 RNU6-158P-201ENST00000517104 100 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.85□□□□□ -2.11
VAMP4O75379 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
VAMP4O75379 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.85□□□□□ -2.11
VAMP4O75379 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VAMP4O75379 Y_RNA.10-201ENST00000362371 110 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 RNU6-905P-201ENST00000384434 107 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 MIR605-201ENST00000385078 83 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 MIR577-201ENST00000385196 96 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 MT-TN-201ENST00000387400 73 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 RNU6-679P-201ENST00000391003 106 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 AP1B1P2-201ENST00000416196 106 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 AL353813.1-201ENST00000440700 253 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 RNU7-2P-201ENST00000516096 62 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 SNORA40.13-201ENST00000516379 120 ntBASIC1.84□□□□□ -2.11
VAMP4O75379 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
VAMP4O75379 Y_RNA.377-201ENST00000365644 108 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 SNORA19.1-201ENST00000410656 129 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 SNORA7.5-201ENST00000410672 110 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 snoU13.2-201ENST00000459201 104 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 AC141557.1-201ENST00000540982 400 ntBASIC1.83□□□□□ -2.12
VAMP4O75379 Y_RNA.93-201ENST00000363066 109 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-832P-201ENST00000363319 107 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 SNORD114-10-201ENST00000363409 72 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-447P-201ENST00000410293 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-1118P-201ENST00000410382 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-1076P-201ENST00000410397 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-355P-201ENST00000410427 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-791P-201ENST00000410467 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-705P-201ENST00000410601 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-1100P-201ENST00000410691 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-860P-201ENST00000410860 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-1217P-201ENST00000411276 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-785P-201ENST00000411324 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNA5SP61-201ENST00000516453 100 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 MIR2115-201ENST00000516657 100 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 MIR4264-201ENST00000583520 66 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 U6.90-201ENST00000614007 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VAMP4O75379 U6.70-201ENST00000620287 104 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 MIR2052-201ENST00000636055 55 ntBASIC1.82□□□□□ -2.12
VAMP4O75379 RNU6-1313P-201ENST00000362622 102 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 RNA5SP264-201ENST00000363115 107 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 SNORA25.3-201ENST00000363205 127 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 RNU6-640P-201ENST00000363693 105 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 MIR206-201ENST00000384872 86 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 SCARNA23-201ENST00000516060 130 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
VAMP4O75379 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
VAMP4O75379 RNY1P13-201ENST00000365030 105 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 RNU6-1237P-201ENST00000384777 107 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 MIR563-201ENST00000385080 79 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 MIR1185-1-201ENST00000408598 86 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 RNA5SP237-201ENST00000410414 113 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms