Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR342-201ENST00000362212 99 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 RNU6-763P-201ENST00000390865 106 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.63□□□□□ -2.51
SHOX2O60902 AC013791.1-201ENST00000616619 62 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 AC073869.9-201ENST00000641610 120 ntBASIC-0.63□□□□□ -2.51
SHOX2O60902 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 RNU6-937P-201ENST00000384325 106 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.64□□□□□ -2.51
SHOX2O60902 AF228730.3-201ENST00000436691 102 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 AC244505.6-201ENST00000452829 130 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 MTND4P17-201ENST00000470444 350 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.64□□□□□ -2.51
SHOX2O60902 MIR4272-201ENST00000635924 64 ntBASIC-0.64□□□□□ -2.51
SHOX2O60902 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 RNU6-702P-201ENST00000364982 107 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORD116-2-201ENST00000384274 95 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORA20-201ENST00000384662 132 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORD116-6-201ENST00000384711 96 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 MIR559-201ENST00000385188 96 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORD41.1-201ENST00000391000 69 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 MTND1P34-201ENST00000438556 671 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORA13-201ENST00000458790 133 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 RNU7-80P-201ENST00000459562 61 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 AC010655.3-201ENST00000478818 450 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 RNU6-720P-201ENST00000516363 108 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 SNORA27.4-201ENST00000516650 95 ntBASIC-0.65□□□□□ -2.51
SHOX2O60902 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 U8.20-201ENST00000459445 131 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 MTCO2P24-201ENST00000515611 426 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 RNA5SP272-201ENST00000516095 111 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 MIR5688-201ENST00000580619 83 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 MIR4306-201ENST00000583390 91 ntBASIC-0.66□□□□□ -2.52
SHOX2O60902 RNU4-58P-201ENST00000363192 141 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 RNA5SP403-201ENST00000363598 108 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 RNY1P13-201ENST00000365030 105 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 RNU6-764P-201ENST00000516396 105 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 RNU6-531P-201ENST00000516694 104 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 C8orf59P2-201ENST00000603441 271 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 AC084368.1-201ENST00000620935 65 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.67□□□□□ -2.52
SHOX2O60902 MIR6841-201ENST00000637129 72 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 AC093726.3-201ENST00000637588 150 ntBASIC-0.67□□□□□ -2.52
SHOX2O60902 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
SHOX2O60902 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 AC006210.1-201ENST00000424882 111 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 SNORD54-201ENST00000459159 67 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 RNU6-397P-201ENST00000516226 104 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 RNU6-699P-201ENST00000517081 110 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 AC026421.1-201ENST00000519101 163 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 MIR5692C2-201ENST00000577959 77 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 MIR4280-201ENST00000582178 76 ntBASIC-0.68□□□□□ -2.52
SHOX2O60902 RNU6-502P-201ENST00000362419 108 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 RNU6-47P-201ENST00000383866 107 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 MIR526A2-201ENST00000390198 65 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
SHOX2O60902 SNORD110-201ENST00000408189 75 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 BX276092.1-201ENST00000427368 251 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 RNU7-104P-201ENST00000459398 79 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 RNU6-358P-201ENST00000516564 75 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 SNORD116.3-201ENST00000517176 78 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 DEFB131E-201ENST00000532329 154 ntBASIC-0.69□□□□□ -2.52
SHOX2O60902 RNU6-845P-201ENST00000362578 103 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 RNU2-55P-201ENST00000411146 174 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 HLA-S-202ENST00000425174 53 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 SNORA25.13-201ENST00000516395 103 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 SNORA40.14-201ENST00000516543 86 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 AC140658.3-201ENST00000567603 271 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 MIR6129-201ENST00000616087 109 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 MIR376A2-201ENST00000636782 80 ntBASIC-0.7□□□□□ -2.52
SHOX2O60902 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 U8.6-201ENST00000364939 135 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 MIR516B1-201ENST00000385211 90 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms