Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-369P-201ENST00000362515 102 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 Y_RNA.116-201ENST00000363292 103 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 SNORA18-201ENST00000384416 132 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 RNU6-1237P-201ENST00000384777 107 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 MIR518E-201ENST00000385252 88 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 AL603908.1-201ENST00000406098 201 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 RNY4P20-201ENST00000516678 93 ntBASIC0.95□□□□□ -2.26
ZIC3O60481 RNU6-235P-201ENST00000362644 107 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 RNU6-934P-201ENST00000365154 107 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 Y_RNA.355-201ENST00000365462 98 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 MIR539-201ENST00000365690 78 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 MT-TF-201ENST00000387314 71 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 SNORD83.1-201ENST00000411362 77 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 RNA5SP33-201ENST00000516687 98 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 AC141846.1-201ENST00000568348 142 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 MIR4452-201ENST00000583004 71 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
ZIC3O60481 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
ZIC3O60481 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNU6-1104P-201ENST00000384723 104 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 MIR1285-1-201ENST00000408593 84 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNA5SP237-201ENST00000410414 113 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RPS26P5-201ENST00000418544 335 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 FABP5P4-201ENST00000437203 171 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RPS29P28-201ENST00000446439 141 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNU6-1211P-201ENST00000459179 105 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNU6-781P-201ENST00000516377 101 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNU6-971P-201ENST00000516920 106 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 RNU7-35P-201ENST00000517174 62 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 MIR548AE2-201ENST00000583456 67 ntBASIC0.93□□□□□ -2.26
ZIC3O60481 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZIC3O60481 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 MIR1827-201ENST00000408549 66 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 RNU6-1086P-201ENST00000410930 100 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 AC022523.2-201ENST00000561045 150 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 MIR6734-201ENST00000621166 68 ntBASIC0.92□□□□□ -2.26
ZIC3O60481 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 MIRLET7F2-201ENST00000385277 83 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 AC067940.1-201ENST00000458411 300 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 U7.7-201ENST00000459276 60 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 MIR1270-201ENST00000459320 83 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 RNU7-79P-201ENST00000516082 62 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 MIR4771-2-201ENST00000577758 74 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 MIR4771-1-201ENST00000582617 74 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 SNORA4-201ENST00000584302 138 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 AC020891.4-201ENST00000605745 93 ntBASIC0.91□□□□□ -2.26
ZIC3O60481 MIR1-1-201ENST00000362147 71 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 Y_RNA.299-201ENST00000364973 94 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 RNY1P13-201ENST00000365030 105 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 SNORA32-201ENST00000384072 121 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 MIR1263-201ENST00000408324 86 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 RNU4-69P-201ENST00000410677 143 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 RNA5SP136-201ENST00000410906 107 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 TMSB4XP3-201ENST00000445144 114 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 snoU13.18-201ENST00000459483 104 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.9□□□□□ -2.27
ZIC3O60481 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZIC3O60481 RNU6-81P-201ENST00000365608 104 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 RNU6-949P-201ENST00000384040 107 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 RNU6-80P-201ENST00000384195 107 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 MT-TI-201ENST00000387365 69 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 U8.15-201ENST00000390947 134 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 RNU7-185P-201ENST00000459215 60 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 MIR4676-201ENST00000583078 72 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.89□□□□□ -2.27
ZIC3O60481 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 AC023934.1-201ENST00000574529 2389 ntBASIC0.89□□□□□ -2.27
ZIC3O60481 Y_RNA.218-201ENST00000364218 104 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 SNORD58C-201ENST00000365223 64 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 AC096949.1-201ENST00000412047 152 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 RNU7-107P-201ENST00000459121 61 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
ZIC3O60481 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
ZIC3O60481 Y_RNA.71-201ENST00000362892 104 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 Y_RNA.198-201ENST00000364013 98 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 RNU6-42P-201ENST00000384165 107 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 COX6CP6-201ENST00000490840 228 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 RNU6-772P-201ENST00000516042 105 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 RNU6-1061P-201ENST00000516530 99 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 RNU6-1234P-201ENST00000516877 103 ntBASIC0.87□□□□□ -2.27
ZIC3O60481 MIR4804-201ENST00000581683 73 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms