Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNA5SP192-201ENST00000364404 120 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 RNU1-141P-201ENST00000364623 158 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 RNY1P2-201ENST00000364820 117 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.94□□□□□ -2.56
SGCEO43556 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.94□□□□□ -2.56
SGCEO43556 AC021146.6-201ENST00000514659 117 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 SNORD116.3-201ENST00000517176 78 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 AC040926.1-201ENST00000530195 238 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 RNY1P9-201ENST00000532431 109 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 MIR4473-201ENST00000583731 91 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.94□□□□□ -2.56
SGCEO43556 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 MIR539-201ENST00000365690 78 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 MIR599-201ENST00000385069 95 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 SCARNA18B-201ENST00000458806 135 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 RNA5SP395-201ENST00000516567 118 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 SNORD38.3-201ENST00000516599 73 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 RNU7-70P-201ENST00000516941 66 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 RNU7-10P-201ENST00000607194 63 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 uc_338.10-201ENST00000621872 182 ntBASIC-0.95□□□□□ -2.56
SGCEO43556 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 SNORD114-29-201ENST00000364819 70 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 AC097635.1-201ENST00000450678 155 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 RNU7-74P-201ENST00000459104 62 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 RNA5SP461-201ENST00000516451 104 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 SNORA40.14-201ENST00000516543 86 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 RNU7-35P-201ENST00000517174 62 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
SGCEO43556 MIR5197-201ENST00000583721 112 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 AC006006.1-201ENST00000603082 144 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 AC007485.1-201ENST00000616755 206 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 AC069503.3-201ENST00000618674 145 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 MIR6086-201ENST00000638065 55 ntBASIC-0.96□□□□□ -2.56
SGCEO43556 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 SNORD56B-201ENST00000384713 71 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 MIR204-201ENST00000385200 110 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 PMCHL1-202ENST00000423102 261 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 RNA5SP33-201ENST00000516687 98 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 AC098479.1-201ENST00000609225 154 ntBASIC-0.97□□□□□ -2.56
SGCEO43556 RNU6-845P-201ENST00000362578 103 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 RNU4-24P-201ENST00000364565 139 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 TRAJ51-201ENST00000504127 63 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 AC140658.3-201ENST00000567603 271 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 MIR4280-201ENST00000582178 76 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 AC097639.2-201ENST00000603159 172 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.98□□□□□ -2.57
SGCEO43556 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 RNU6-484P-201ENST00000384016 107 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 RNU6-900P-201ENST00000384498 102 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 RNU6-429P-201ENST00000384582 108 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 AC093423.1-201ENST00000440817 142 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 RNU6-720P-201ENST00000516363 108 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 RNU6-358P-201ENST00000516564 75 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
SGCEO43556 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 MTND5P40-201ENST00000559945 246 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 MIR6851-201ENST00000617060 67 ntBASIC-0.99□□□□□ -2.57
SGCEO43556 SNORD115-44-201ENST00000365391 82 ntBASIC-1□□□□□ -2.57
SGCEO43556 RNU6-431P-201ENST00000383874 107 ntBASIC-1□□□□□ -2.57
SGCEO43556 RNU6-1040P-201ENST00000383974 107 ntBASIC-1□□□□□ -2.57
SGCEO43556 SNORD64-201ENST00000386683 67 ntBASIC-1□□□□□ -2.57
SGCEO43556 MTND4LP30-201ENST00000454092 297 ntBASIC-1□□□□□ -2.57
SGCEO43556 RNU6-507P-201ENST00000516045 100 ntBASIC-1□□□□□ -2.57
SGCEO43556 RNU6-559P-201ENST00000516151 98 ntBASIC-1□□□□□ -2.57
SGCEO43556 RNU7-13P-201ENST00000516413 62 ntBASIC-1□□□□□ -2.57
SGCEO43556 AC026407.1-201ENST00000518369 204 ntBASIC-1□□□□□ -2.57
SGCEO43556 MIR3165-201ENST00000579874 75 ntBASIC-1□□□□□ -2.57
SGCEO43556 MIR548AE1-201ENST00000583292 70 ntBASIC-1□□□□□ -2.57
SGCEO43556 MIR4306-201ENST00000583390 91 ntBASIC-1□□□□□ -2.57
SGCEO43556 SNORD113-8-201ENST00000363497 74 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 302.5 ms