Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-1237P-201ENST00000384777 107 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 RNU6-1165P-201ENST00000410119 107 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 RNA5SP237-201ENST00000410414 113 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 Y_RNA.703-201ENST00000516846 111 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 RNU6-1258P-201ENST00000516911 111 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
PRPF3O43395 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 U7.2-201ENST00000607576 63 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.16□□□□□ -2.22
PRPF3O43395 RNU6-934P-201ENST00000365154 107 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 Y_RNA.366-201ENST00000365540 102 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 RNU7-113P-201ENST00000459273 62 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 uc_338.6-201ENST00000613544 171 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 MIR6788-201ENST00000618842 66 ntBASIC1.15□□□□□ -2.23
PRPF3O43395 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 RNU1-36P-201ENST00000365130 165 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 Y_RNA.568-201ENST00000384742 113 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 MIR598-201ENST00000384868 97 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 MIR563-201ENST00000385080 79 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 RNU7-164P-201ENST00000459221 62 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 AC113410.1-201ENST00000505029 247 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 MIR3133-201ENST00000583157 78 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 AC108081.1-201ENST00000604358 221 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 AL137067.1-201ENST00000615933 120 ntBASIC1.14□□□□□ -2.23
PRPF3O43395 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PRPF3O43395 RNU6-774P-201ENST00000363238 107 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 RNU6-746P-201ENST00000384112 109 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 RNU6-342P-201ENST00000384521 104 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 RNU2-35P-201ENST00000516446 142 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 AL662814.1-201ENST00000617364 121 ntBASIC1.13□□□□□ -2.23
PRPF3O43395 Y_RNA.36-201ENST00000362602 112 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 Y_RNA.114-201ENST00000363265 113 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 Y_RNA.294-201ENST00000364916 102 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 SNORA18-201ENST00000384416 132 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 AL512326.2-201ENST00000426359 151 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 MTND4LP9-201ENST00000427694 174 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 AC004812.1-201ENST00000540773 146 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 MIR4771-2-201ENST00000577758 74 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 MIR4771-1-201ENST00000582617 74 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 TUG1_4.1-201ENST00000619464 181 ntBASIC1.12□□□□□ -2.23
PRPF3O43395 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PRPF3O43395 MIR30D-201ENST00000362283 70 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 Y_RNA.298-201ENST00000364960 107 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 Y_RNA.470-201ENST00000384307 117 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 MIR100-201ENST00000385259 80 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 SNORD89-201ENST00000390981 114 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 RNU7-123P-201ENST00000515911 60 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 RNA5SP33-201ENST00000516687 98 ntBASIC1.11□□□□□ -2.23
PRPF3O43395 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
PRPF3O43395 SNORD115-2-201ENST00000362842 82 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 RNU6-647P-201ENST00000364243 107 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 SNORD115-20-201ENST00000365099 82 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 Y_RNA.531-201ENST00000384589 121 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 RNU6-257P-201ENST00000410238 98 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
PRPF3O43395 AC141846.1-201ENST00000568348 142 ntBASIC1.09□□□□□ -2.23
PRPF3O43395 MIR6779-201ENST00000617283 64 ntBASIC1.09□□□□□ -2.23
PRPF3O43395 PVT1_3.1-201ENST00000620853 95 ntBASIC1.09□□□□□ -2.23
PRPF3O43395 AC023934.1-201ENST00000574529 2389 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 MIR548M-201ENST00000408260 86 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 RNU6-1086P-201ENST00000410930 100 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 RPL39P25-201ENST00000449384 154 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.08□□□□□ -2.24
PRPF3O43395 RNY4P20-201ENST00000516678 93 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.08□□□□□ -2.24
PRPF3O43395 RNU6-369P-201ENST00000362515 102 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 Y_RNA.280-201ENST00000364765 112 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PRPF3O43395 SNORA32-201ENST00000384072 121 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 AL158147.1-201ENST00000443970 75 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.07□□□□□ -2.24
PRPF3O43395 RNU6-977P-201ENST00000516411 103 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
PRPF3O43395 Y_RNA.299-201ENST00000364973 94 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 MIR1257-201ENST00000408490 117 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 RNU7-185P-201ENST00000459215 60 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 RN7SKP19-201ENST00000516016 252 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 IGKV1-22-201ENST00000524313 326 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 MIR548AE2-201ENST00000583456 67 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 AC020891.4-201ENST00000605745 93 ntBASIC1.06□□□□□ -2.24
PRPF3O43395 SNORD50.2-201ENST00000365465 70 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 RNU6-187P-201ENST00000384139 106 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms