Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNU6-794P-201ENST00000517261 64 ntBASIC0.56□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC112693.2-201ENST00000556538 232 ntBASIC0.56□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR3612-201ENST00000579753 87 ntBASIC0.56□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR4305-201ENST00000583252 102 ntBASIC0.56□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 PCNPP3-201ENST00000393579 471 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU7-197P-201ENST00000458836 62 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU7-113P-201ENST00000459273 62 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 TRMT112P2-201ENST00000512910 132 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU2-35P-201ENST00000516446 142 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR4769-201ENST00000584126 77 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU4-11P-201ENST00000365287 132 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 SNORD18B-201ENST00000365659 72 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU4-83P-201ENST00000410863 133 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AL512326.2-201ENST00000426359 151 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RPL39P25-201ENST00000449384 154 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC002350.1-201ENST00000490759 375 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-240P-201ENST00000516098 97 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 Y_RNA.686-201ENST00000516548 134 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 Y_RNA.778-201ENST00000620203 90 ntBASIC0.54□□□□□ -2.32
TRBV4-1A0A0J9YWV2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-508P-201ENST00000363231 103 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-309P-201ENST00000364573 106 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-1130P-201ENST00000365434 107 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-449P-201ENST00000383914 107 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-886P-201ENST00000384319 105 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-321P-201ENST00000410912 106 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU7-79P-201ENST00000516082 62 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNA5SP33-201ENST00000516687 98 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-448P-201ENST00000517052 107 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC133485.4-201ENST00000561835 220 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC138907.4-201ENST00000570107 226 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR4498-201ENST00000577599 66 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 MIR4491-201ENST00000581087 68 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 AC021443.1-201ENST00000604478 211 ntBASIC0.53□□□□□ -2.32
TRBV4-1A0A0J9YWV2 RNU6-151P-201ENST00000364158 107 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR140-201ENST00000385282 100 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.690-201ENST00000516603 95 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU6-765P-201ENST00000516916 99 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC090425.1-201ENST00000610007 140 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR6082-201ENST00000613604 109 ntBASIC0.52□□□□□ -2.33
TRBV4-1A0A0J9YWV2 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNA5SP102-201ENST00000516865 106 ntBASIC0.51□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR3144-201ENST00000579460 79 ntBASIC0.51□□□□□ -2.33
TRBV4-1A0A0J9YWV2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU1-93P-201ENST00000364704 169 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 SNORD116-18-201ENST00000383961 92 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU7-164P-201ENST00000459221 62 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU7-123P-201ENST00000515911 60 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR548AE2-201ENST00000583456 67 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC104984.5-201ENST00000586878 94 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC098479.1-201ENST00000609225 154 ntBASIC0.5□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU6-403P-201ENST00000363163 104 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.150-201ENST00000363562 102 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.270-201ENST00000364693 104 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU6-804P-201ENST00000384286 107 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.298-201ENST00000364960 107 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 SNORA32-201ENST00000384072 121 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.555-201ENST00000384673 110 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU6-460P-201ENST00000391158 108 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC108059.2-201ENST00000434626 151 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR1270-201ENST00000459320 83 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC108729.3-201ENST00000513484 108 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR3121-201ENST00000579680 77 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC108081.1-201ENST00000604358 221 ntBASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AL589743.1-201ENST00000551932 2712 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.299-201ENST00000364973 94 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 Y_RNA.398-201ENST00000383952 99 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR520E-201ENST00000384867 87 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 RNU7-137P-201ENST00000516788 62 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 MIR3671-201ENST00000580455 88 ntBASIC0.47□□□□□ -2.33
TRBV4-1A0A0J9YWV2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms