Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AP000753.3-201ENST00000604083 169 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AL512598.1-201ENST00000610158 273 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR1255B1-201ENST00000636325 63 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1325P-201ENST00000364905 105 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1056P-201ENST00000383996 107 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA80D-201ENST00000384488 135 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD116-21-201ENST00000384507 92 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC023827.1-201ENST00000569247 97 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR4421-201ENST00000578133 69 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR4679-2-201ENST00000578358 77 ntBASIC1.04□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNY4P6-201ENST00000363667 96 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-616P-201ENST00000384353 107 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD67.1-201ENST00000516618 108 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNY4P18-201ENST00000391107 89 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC063976.4-201ENST00000421971 163 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AL353813.1-201ENST00000440700 253 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC015712.3-201ENST00000559380 164 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-949P-201ENST00000384040 107 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-880P-201ENST00000384526 107 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR759-201ENST00000390224 91 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC015818.7-201ENST00000428754 109 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC087499.7-201ENST00000441958 109 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU7-95P-201ENST00000459222 64 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU7-137P-201ENST00000516788 62 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-94P-201ENST00000607728 107 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR6715A-201ENST00000615929 79 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AL353997.5-201ENST00000618886 171 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
SAA2-SAA4A0A096LPE2 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORA63.5-201ENST00000363548 123 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR206-201ENST00000384872 86 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 U8.15-201ENST00000390947 134 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNA5SP237-201ENST00000410414 113 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORD83.1-201ENST00000411362 77 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU7-90P-201ENST00000459216 62 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR4298-201ENST00000584380 73 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR4781-201ENST00000585250 76 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORA7.1-201ENST00000363750 139 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORD12-201ENST00000391002 90 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC108667.1-201ENST00000428618 249 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RPL39P34-201ENST00000477141 156 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC105081.1-201ENST00000617727 106 ntBASIC0.99□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNA5SP99-201ENST00000364020 114 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 U8.6-201ENST00000364939 135 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-44P-201ENST00000384045 107 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MT-TF-201ENST00000387314 71 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU7-40P-201ENST00000516397 64 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AC020891.4-201ENST00000605745 93 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 AL162726.3-218ENST00000636401 95 ntBASIC0.98□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-363P-201ENST00000362895 105 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU4-67P-201ENST00000364569 141 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-1107P-201ENST00000364817 104 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 MIR605-201ENST00000385078 83 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 RNU6-679P-201ENST00000391003 106 ntBASIC0.97□□□□□ -2.25
SAA2-SAA4A0A096LPE2 SNORD77B-201ENST00000391112 67 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms