Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Pfdn1Q9CWM4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfdn1Q9CWM4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfdn1Q9CWM4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfdn1Q9CWM4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms