Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Gm10566-201ENSMUST00000086739 996 ntBASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh20Q8BIZ0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Gm33142-201ENSMUST00000193913 867 ntBASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh20Q8BIZ0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh20Q8BIZ0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.64■□□□□ 0.1
Pcdh20Q8BIZ0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh20Q8BIZ0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms