Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krr1Q8BGA5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Krr1Q8BGA5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.18■□□□□ 0.02
Krr1Q8BGA5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Krr1Q8BGA5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Gm2274-201ENSMUST00000184539 609 ntBASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Gm7370-201ENSMUST00000219471 767 ntBASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Krr1Q8BGA5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Gm11539-201ENSMUST00000119837 557 ntBASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Gm13436-201ENSMUST00000120418 567 ntBASIC15.15■□□□□ 0.02
Krr1Q8BGA5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms