Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.31■□□□□ 0.2
Ddx42Q810A7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.31■□□□□ 0.2
Ddx42Q810A7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx42Q810A7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.3■□□□□ 0.2
Ddx42Q810A7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.3■□□□□ 0.2
Ddx42Q810A7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx42Q810A7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.29■□□□□ 0.2
Ddx42Q810A7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.29■□□□□ 0.2
Ddx42Q810A7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.29■□□□□ 0.2
Ddx42Q810A7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.29■□□□□ 0.2
Ddx42Q810A7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.29■□□□□ 0.2
Ddx42Q810A7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx42Q810A7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Gm14859-201ENSMUST00000117752 357 ntBASIC16.28■□□□□ 0.2
Ddx42Q810A7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Gm24841-201ENSMUST00000158676 357 ntBASIC16.28■□□□□ 0.2
Ddx42Q810A7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.28■□□□□ 0.2
Ddx42Q810A7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx42Q810A7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.27■□□□□ 0.2
Ddx42Q810A7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.27■□□□□ 0.2
Ddx42Q810A7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx42Q810A7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms