Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff1Q08423 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tff1Q08423 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Tff1Q08423 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tff1Q08423 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Tff1Q08423 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tff1Q08423 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Tff1Q08423 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tff1Q08423 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tff1Q08423 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tff1Q08423 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.33□□□□□ -0.28
Tff1Q08423 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.33□□□□□ -0.28
Tff1Q08423 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tff1Q08423 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Gm7461-201ENSMUST00000058918 827 ntBASIC13.33□□□□□ -0.28
Tff1Q08423 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tff1Q08423 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Tff1Q08423 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff1Q08423 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Tff1Q08423 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.33□□□□□ -0.28
Tff1Q08423 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tff1Q08423 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tff1Q08423 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Tff1Q08423 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.32□□□□□ -0.28
Tff1Q08423 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Gm17971-201ENSMUST00000190239 806 ntBASIC13.32□□□□□ -0.28
Tff1Q08423 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.32□□□□□ -0.28
Tff1Q08423 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tff1Q08423 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.32□□□□□ -0.28
Tff1Q08423 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.32□□□□□ -0.28
Tff1Q08423 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff1Q08423 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Prob1-201ENSMUST00000097619 3021 ntBASIC13.31□□□□□ -0.28
Tff1Q08423 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tff1Q08423 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tff1Q08423 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Tff1Q08423 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tff1Q08423 Actl10-202ENSMUST00000226583 1501 ntBASIC13.31□□□□□ -0.28
Tff1Q08423 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms