Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MIR663A-201ENST00000385250 93 ntBASIC16.66■□□□□ 0.26
ALX3O95076 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.66■□□□□ 0.26
ALX3O95076 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
ALX3O95076 CROCCP5-201ENST00000436658 830 ntBASIC16.66■□□□□ 0.26
ALX3O95076 YBX1P10-201ENST00000444752 975 ntBASIC16.66■□□□□ 0.26
ALX3O95076 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.66■□□□□ 0.26
ALX3O95076 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.66■□□□□ 0.26
ALX3O95076 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.66■□□□□ 0.26
ALX3O95076 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.66■□□□□ 0.26
ALX3O95076 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 AL161938.1-201ENST00000569833 2180 ntBASIC16.66■□□□□ 0.26
ALX3O95076 AL121906.2-201ENST00000621597 723 ntBASIC16.66■□□□□ 0.26
ALX3O95076 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.66■□□□□ 0.26
ALX3O95076 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALX3O95076 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
ALX3O95076 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALX3O95076 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.65■□□□□ 0.26
ALX3O95076 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.65■□□□□ 0.26
ALX3O95076 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
ALX3O95076 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
ALX3O95076 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 KRT8P8-201ENST00000434750 1448 ntBASIC16.65■□□□□ 0.26
ALX3O95076 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.65■□□□□ 0.26
ALX3O95076 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.65■□□□□ 0.26
ALX3O95076 RPS2P52-201ENST00000469610 820 ntBASIC16.65■□□□□ 0.26
ALX3O95076 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 AC083906.2-201ENST00000511578 360 ntBASIC16.65■□□□□ 0.26
ALX3O95076 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ALX3O95076 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.65■□□□□ 0.26
ALX3O95076 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.65■□□□□ 0.26
ALX3O95076 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.65■□□□□ 0.26
ALX3O95076 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.65■□□□□ 0.26
ALX3O95076 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ALX3O95076 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ALX3O95076 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALX3O95076 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.26
ALX3O95076 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
ALX3O95076 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.64■□□□□ 0.25
ALX3O95076 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 AC104417.2-201ENST00000562989 1793 ntBASIC16.64■□□□□ 0.25
ALX3O95076 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.64■□□□□ 0.25
ALX3O95076 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.64■□□□□ 0.25
ALX3O95076 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.64■□□□□ 0.25
ALX3O95076 AC006970.2-201ENST00000450065 779 ntBASIC16.64■□□□□ 0.25
ALX3O95076 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.64■□□□□ 0.25
ALX3O95076 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.64■□□□□ 0.25
ALX3O95076 HLA-B-256ENST00000639848 1089 ntBASIC16.64■□□□□ 0.25
ALX3O95076 HTR7P1-202ENST00000624664 4411 ntBASIC16.64■□□□□ 0.25
ALX3O95076 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.64■□□□□ 0.25
ALX3O95076 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.64■□□□□ 0.25
ALX3O95076 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 AP006587.1-201ENST00000534129 1502 ntBASIC16.64■□□□□ 0.25
ALX3O95076 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ALX3O95076 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALX3O95076 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ALX3O95076 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.63■□□□□ 0.25
ALX3O95076 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.63■□□□□ 0.25
ALX3O95076 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.63■□□□□ 0.25
ALX3O95076 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 AL162727.3-201ENST00000635661 2787 ntBASIC16.63■□□□□ 0.25
ALX3O95076 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALX3O95076 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms