Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHD2O14647 AC008556.1-201ENST00000610908 2040 ntBASIC26.26■■□□□ 1.79
CHD2O14647 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD2O14647 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.26■■□□□ 1.79
CHD2O14647 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC26.25■■□□□ 1.79
CHD2O14647 IGHV3-41-201ENST00000613121 348 ntBASIC26.25■■□□□ 1.79
CHD2O14647 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD2O14647 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.25■■□□□ 1.79
CHD2O14647 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD2O14647 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.25■■□□□ 1.79
CHD2O14647 AL049840.3-201ENST00000602669 611 ntBASIC26.25■■□□□ 1.79
CHD2O14647 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHD2O14647 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD2O14647 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.24■■□□□ 1.79
CHD2O14647 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
CHD2O14647 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CHD2O14647 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.24■■□□□ 1.79
CHD2O14647 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.24■■□□□ 1.79
CHD2O14647 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC26.24■■□□□ 1.79
CHD2O14647 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC26.24■■□□□ 1.79
CHD2O14647 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHD2O14647 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CHD2O14647 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.23■■□□□ 1.79
CHD2O14647 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
CHD2O14647 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD2O14647 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CHD2O14647 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD2O14647 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC26.23■■□□□ 1.79
CHD2O14647 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.23■■□□□ 1.79
CHD2O14647 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD2O14647 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD2O14647 PMS2P7-201ENST00000506558 1336 ntBASIC26.23■■□□□ 1.79
CHD2O14647 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.22■■□□□ 1.79
CHD2O14647 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.22■■□□□ 1.79
CHD2O14647 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD2O14647 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 IGHV3-22-201ENST00000520721 359 ntBASIC26.22■■□□□ 1.79
CHD2O14647 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD2O14647 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.22■■□□□ 1.79
CHD2O14647 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.22■■□□□ 1.79
CHD2O14647 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD2O14647 KATNBL1P6-202ENST00000562413 1466 ntBASIC26.22■■□□□ 1.79
CHD2O14647 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHD2O14647 PIN1-206ENST00000587625 878 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.21■■□□□ 1.79
CHD2O14647 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHD2O14647 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.21■■□□□ 1.79
CHD2O14647 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CHD2O14647 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD2O14647 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHD2O14647 AL512353.2-201ENST00000448759 1962 ntBASIC26.2■■□□□ 1.78
CHD2O14647 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD2O14647 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD2O14647 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC26.2■■□□□ 1.78
CHD2O14647 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC26.2■■□□□ 1.78
CHD2O14647 RPL13AP23-201ENST00000480739 586 ntBASIC26.2■■□□□ 1.78
CHD2O14647 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CHD2O14647 MIR3180-4-201ENST00000582223 153 ntBASIC26.2■■□□□ 1.78
CHD2O14647 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.2■■□□□ 1.78
CHD2O14647 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD2O14647 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms