Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNA5SP476-201ENST00000516613 103 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 RNU6-531P-201ENST00000516694 104 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 CR383656.4-201ENST00000546909 122 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 MIR378D2-201ENST00000580636 98 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNORD115-24-201ENST00000363528 82 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 RNA5SP403-201ENST00000363598 108 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNORA18-201ENST00000384416 132 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNORD41.1-201ENST00000391000 69 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 MIR876-201ENST00000401147 81 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 HMGN2P22-201ENST00000427588 175 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 AC109327.2-201ENST00000448339 378 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNRPGP8-201ENST00000454064 226 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 AC138749.4-201ENST00000563970 127 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 AL442067.1-201ENST00000613261 223 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 MIR376A1-201ENST00000616574 68 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 AC021613.1-201ENST00000623880 111 ntBASIC-0.4□□□□□ -2.47
USH1CQ9Y6N9 MIR148A-201ENST00000362215 68 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 MIR626-201ENST00000385032 94 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 RNU6-507P-201ENST00000516045 100 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 RNU2-60P-201ENST00000517290 128 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 AL590491.3-201ENST00000610731 82 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 MIR6514-201ENST00000622549 70 ntBASIC-0.41□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 RNU4-73P-201ENST00000363164 141 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 RNU6-662P-201ENST00000384253 104 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 SNORA75.1-201ENST00000391130 148 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 RNU6-876P-201ENST00000391295 104 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 MIR1302-11-201ENST00000408051 138 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 MIR1302-9-201ENST00000408365 138 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 MIR1302-10-201ENST00000408734 138 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 RPL21P38-201ENST00000418090 167 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 AL731563.1-201ENST00000442202 214 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 MIR1302-2-201ENST00000607096 138 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 snoU18.1-201ENST00000629629 71 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 AC073869.9-201ENST00000641610 120 ntBASIC-0.42□□□□□ -2.48
USH1CQ9Y6N9 MIR101-1-201ENST00000362265 75 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU4-58P-201ENST00000363192 141 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNA5SP205-201ENST00000364653 136 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU6-290P-201ENST00000365212 101 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNY3P5-201ENST00000384127 102 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 AC244250.2-201ENST00000418731 148 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 MTND4LP30-201ENST00000454092 297 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU6-976P-201ENST00000516086 111 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 RNU7-35P-201ENST00000517174 62 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 AL132765.2-201ENST00000610812 351 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 MIR6507-201ENST00000613630 70 ntBASIC-0.43□□□□□ -2.48
USH1CQ9Y6N9 UBE2WP1-201ENST00000362030 340 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 RNA5SP133-201ENST00000363368 119 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 SNORD49B-201ENST00000365172 72 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 RNU6-326P-201ENST00000365480 107 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 RNU6-811P-201ENST00000384069 107 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 SNORA20-201ENST00000384662 132 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 RNU6-121P-201ENST00000410525 99 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 AL022718.1-201ENST00000412004 84 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 SNORD19B-201ENST00000459623 84 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 SNORA27.4-201ENST00000516650 95 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.44□□□□□ -2.48
USH1CQ9Y6N9 MIR3129-201ENST00000581095 76 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms