Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 MIR1302-4-201ENST00000408701 150 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 RNU4-62P-201ENST00000410125 130 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 RNU6-602P-201ENST00000411155 105 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 RNU7-35P-201ENST00000517174 62 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 MIR4251-201ENST00000635819 61 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 Y_RNA.107-201ENST00000363190 121 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 RNU6-679P-201ENST00000391003 106 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
SIT1Q9Y3P8 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 RNA5SP48-201ENST00000363969 126 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 MIR488-201ENST00000365739 83 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 MIR605-201ENST00000385078 83 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 SNORD41-201ENST00000386967 70 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 CYP3A52P-201ENST00000563326 91 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 MIR548AO-201ENST00000579992 96 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
SIT1Q9Y3P8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 MIR6073-201ENST00000352083 89 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 RNU6-1313P-201ENST00000362622 102 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 RNA5SP259-201ENST00000365541 109 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 RNU7-41P-201ENST00000515917 61 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 RNU6-521P-201ENST00000516663 105 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 AL357312.1-201ENST00000603879 298 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIT1Q9Y3P8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-1131P-201ENST00000364955 107 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-294P-201ENST00000364999 102 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 SNORD115-35-201ENST00000365122 82 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-439P-201ENST00000384188 106 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-1201P-201ENST00000384227 107 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-49P-201ENST00000384256 107 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 RNU6-1086P-201ENST00000410930 100 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 AC245047.7-201ENST00000440265 293 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
SIT1Q9Y3P8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SIT1Q9Y3P8 Y_RNA.220-201ENST00000364244 109 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 SNORA32-201ENST00000384072 121 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 RNU6-342P-201ENST00000384521 104 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 SNORD38B-201ENST00000384690 67 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 MIR489-201ENST00000384923 84 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 SNORA7.5-201ENST00000410672 110 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 AC004941.2-201ENST00000427009 228 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 SNORD111.1-201ENST00000516421 86 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 MIR6895-201ENST00000613497 78 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 MALAT1.1-201ENST00000618249 95 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 SNORD38B-202ENST00000625943 69 ntBASIC1.9□□□□□ -2.11
SIT1Q9Y3P8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 SNORA18-201ENST00000384416 132 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 Y_RNA.558-201ENST00000384685 113 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 MIR144-201ENST00000384886 86 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 RNU7-2P-201ENST00000516096 62 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 AL442128.1-201ENST00000615151 90 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
SIT1Q9Y3P8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 RNU6-170P-201ENST00000362832 104 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 Y_RNA.96-201ENST00000363092 109 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 SNORD45B-201ENST00000364617 72 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 Y_RNA.342-201ENST00000365352 113 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 RNA5SP181-201ENST00000410246 98 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 RNA5SP402-201ENST00000517148 110 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 RNU6-844P-201ENST00000517175 102 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 MIR4439-201ENST00000583746 80 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIT1Q9Y3P8 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 snoU13.18-201ENST00000459483 104 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 MIR4299-201ENST00000577899 72 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 MIR5694-201ENST00000581190 76 ntBASIC1.87□□□□□ -2.11
SIT1Q9Y3P8 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms